ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	ndhB	NADH dehydrogenase subunit 2
osa-u.5	ndhB	NADH dehydrogenase subunit 2
zma-u.5	ndhB	NADH dehydrogenase subunit 2
zma-u.5	ndhB	NADH dehydrogenase subunit 2
ath-u.5	ndhB	NADH dehydrogenase subunit 2
ath-u.5	ndhB	NADH dehydrogenase subunit 2
gma-u.5	ndhB	NADH dehydrogenase subunit 2
gma-u.5	ndhB	NADH dehydrogenase subunit 2
sly-u.5	ndhB	NADH-plastoquinone oxidoreductase subunit 2
sly-u.5	ndhB	NADH-plastoquinone oxidoreductase subunit 2
vvi-u.5	ndhB	NADH dehydrogenase subunit 2
vvi-u.5	ndhB	NADH dehydrogenase subunit 2
ppo-u.5	ndhB	NADH dehydrogenase subunit 2
ppo-u.5	ndhB	NADH dehydrogenase subunit 2
mtr-u.5	120579656	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic-like
mtr-u.5	ndhB	NADH dehydrogenase subunit 2

Annotation

functional annotation

KEGG

taes00190 [list] [network] Oxidative phosphorylation (540 genes)

GO BP

GO CC

GO MF

Protein

NP_114301.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, plas 3, cyto_plas 3, nucl 1, vacu 1, cyto_pero 1, cysk_plas 1, mito_plas 1

(predict for NP_114301.1)

Subcellular
localization
TargetP

scret 8, other 7

(predict for NP_114301.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for ndhB .	osa-u.5 for ndhB .	zma-u.5 for ndhB .	zma-u.5 for ndhB .	ath-u.5 for ndhB .	ath-u.5 for ndhB .	gma-u.5 for ndhB .	gma-u.5 for ndhB .	sly-u.5 for ndhB .	sly-u.5 for ndhB .	vvi-u.5 for ndhB .	vvi-u.5 for ndhB .	ppo-u.5 for ndhB .	ppo-u.5 for ndhB .	mtr-u.5 for 120579656 .	mtr-u.5 for ndhB .

Ortholog

Ortholog ID: 1598

Species

ath

gma

sly

osa

zma

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

ndhB

ndhB

ndhB

orf101d

ndhB

Function^*

NADH dehydrogenase subunit 2

NADH-plastoquinone oxidoreductase subunit 2

NADH dehydrogenase subunit 2

NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic-like

NADH dehydrogenase subunit 2

NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic-like

NADH dehydrogenase subunit 2

hypothetical protein

NADH dehydrogenase subunit 2

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	9
ath03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	8
ath03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	9
gma03010	Ribosome	8
gma03020	RNA polymerase	2
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8
gma03010	Ribosome	8
gma00195	Photosynthesis	3
gma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	10
sly00195	Photosynthesis	8
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	9
sly00190	Oxidative phosphorylation	8
sly00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	11
osa03010	Ribosome	5
osa00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	11
osa03010	Ribosome	4
osa00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	9
zma00190	Oxidative phosphorylation	8
zma00195	Photosynthesis	6
zma03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	9
zma00195	Photosynthesis	7
zma03020	RNA polymerase	6
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	14
vvi00195	Photosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	10
vvi00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8
ppo03020	RNA polymerase	5
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	10
ppo03010	Ribosome	4
ppo03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	5
mtr00190	Oxidative phosphorylation	3
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5
mtr00195	Photosynthesis	4
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	12
hvu03010	Ribosome	6
hvu00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	3
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	3
ghi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	8
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9
sbi00195	Photosynthesis	8
sbi03020	RNA polymerase	5
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	10
sbi00190	Oxidative phosphorylation	8
sbi03010	Ribosome	3
sbi03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	7
sot03010	Ribosome	7
sot00970	Aminoacyl-tRNA biosynthesis	3
sot00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	8
sot03010	Ribosome	7
sot00195	Photosynthesis	4
sot00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7
bdi03010	Ribosome	6
bdi00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7
bdi03010	Ribosome	6
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9
nta00195	Photosynthesis	6
nta03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9
nta00195	Photosynthesis	6
nta03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

4042815

844713

3989342

3989377

3950395

3950469

3131396

3131397

845180

845181

4025014

4025030

4929721

4929763

120579656

5333121

123180806

123422468

121228846

121229164

11542035

11542106

4549188

4549098

4099891

4099922

4271162

4271170

6439820

6439822

3205192

800509

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to ndhB (osa-u.5 coexpression data)

Top 50 enrichment test to ndhB (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	sot	hvu	tae	cit	sbi	ghi	cre	bna	nta	bdi	bra
Paralog	2	2	2	2	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to ndhB (osa-u.5 coexpression data)

Top 50 enrichment test to ndhB (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**