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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103633099   ornithine decarboxylase 
 zma-u.5   100274319   ornithine decarboxylase 
 osa-u.5   4347746   ornithine decarboxylase 1B, chloroplastic 
 gma-u.5   ODC2   ornithine decarboxylase 
 gma-u.5   548088   ornithine decarboxylase 
 sly-u.5   ODC   ornithine decarboxylase 
 vvi-u.5   100232922   ornithine decarboxylase 
 ppo-u.5   7494661   ornithine decarboxylase 
 mtr-u.5   11426024   ornithine decarboxylase 

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Top 50 coexpressed genes to 103633099 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103633099 (zma-u.5 coexpression data)

CoexMap"8054990"


sbiLOC8054990 | Entrez gene ID : 8054990      
Species zma osa gma sly vvi ppo mtr bdi hvu bra cit bna ath sbi ghi sot nta cre tae
Paralog 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00330 [list] [network] Arginine and proline metabolism (57 genes)
sbi00480 [list] [network] Glutathione metabolism (125 genes)
sbi04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0033387 [list] [network] putrescine biosynthetic process from arginine, via ornithine  (5 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004586 [list] [network] ornithine decarboxylase activity  (5 genes)  IEA  
Protein XP_002462765.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 4,  cyto 2  (predict for XP_002462765.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002462765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103633099
zma-u.5
for
100274319
osa-u.5
for
4347746
gma-u.5
for
ODC2
gma-u.5
for
548088
sly-u.5
for
ODC
vvi-u.5
for
100232922
ppo-u.5
for
7494661
mtr-u.5
for
11426024


Ortholog ID: 4658
Species sbi zma osa hvu bdi bdi gma gma sly vvi ppo mtr ghi ghi sot cit cit nta cre cre
Symbol LOC8077429 LOC100274319 LOC4347746 LOC123397695 LOC100842801 LOC100841583 ODC2 LOC548088 ODC LOC100232922 LOC7494661 LOC11426024 LOC107888902 LOC107888839 LOC102584472 LOC102619784 LOC102631326 LOC107769544 CHLRE_16g683371v5 CHLRE_03g159500v5
Function* ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase 1B, chloroplastic ornithine decarboxylase-like ornithine decarboxylase ornithine decarboxylase-like ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase ornithine decarboxylase-like ornithine decarboxylase 1B, chloroplastic-like ornithine decarboxylase 1B, chloroplastic-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 4
sbi00480 Glutathione metabolism 3
sbi00966 Glucosinolate biosynthesis 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma00330 Arginine and proline metabolism 2
zma00480 Glutathione metabolism 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 5
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
osa01230 Biosynthesis of amino acids 4
osa00360 Phenylalanine metabolism 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 6
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bdi00591 Linoleic acid metabolism 3
bdi00330 Arginine and proline metabolism 3
bdi00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 10
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 5
bdi00270 Cysteine and methionine metabolism 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 8
sly00941 Flavonoid biosynthesis 4
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sly00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00999 Biosynthesis of various plant secondary metabolites 6
mtr00460 Cyanoamino acid metabolism 5
mtr00500 Starch and sucrose metabolism 5
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 3
ghi00480 Glutathione metabolism 3
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 3
ghi00480 Glutathione metabolism 3
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00330 Arginine and proline metabolism 4
sot00020 Citrate cycle (TCA cycle) 3
sot00900 Terpenoid backbone biosynthesis 3
sot00940 Phenylpropanoid biosynthesis 3
sot00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
cit00260 Glycine, serine and threonine metabolism 2
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 3
nta00480 Glutathione metabolism 3
nta00270 Cysteine and methionine metabolism 2
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 5
cre03272 Virion - Hepatitis viruses 3
cre03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8077429 100274319 4347746 123397695 100842801 100841583 547682 548088 544209 100232922 7494661 11426024 107888902 107888839 102584472 102619784 102631326 107769544 5724425 5723008
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