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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055041   eukaryotic translation initiation factor 3 subunit J-A 
 zma-u.5   100283402   eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa 
 zma-u.5   100283844   uncharacterized LOC100283844 
 osa-u.5   4339203   uncharacterized LOC4339203 
 osa-u.5   4328129   uncharacterized LOC4328129 
 ath-u.5   AT5G37475   Translation initiation factor eIF3 subunit 
 ath-u.5   AT1G66070   Translation initiation factor eIF3 subunit 
 gma-u.5   100783973   eukaryotic translation initiation factor 3 subunit J 
 gma-u.5   100775181   eukaryotic translation initiation factor 3 subunit J 
 sly-u.5   101255357   uncharacterized LOC101255357 
 vvi-u.5   100242541   uncharacterized LOC100242541 
 ppo-u.5   7493579   uncharacterized LOC7493579 
 ppo-u.5   18106562   uncharacterized LOC18106562 
 mtr-u.5   25497362   eukaryotic translation initiation factor 3 subunit J 

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Top 50 coexpressed genes to 8055041 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055041 (sbi-r.1 coexpression data)

CoexMap"8055041"


sbiLOC8055041 | Entrez gene ID : 8055041      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (18 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (59 genes)  IEA  
Protein XP_002453220.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1  (predict for XP_002453220.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002453220.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055041

.
zma-u.5
for
100283402

.
zma-u.5
for
100283844

.
osa-u.5
for
4339203

.
osa-u.5
for
4328129

.
ath-u.5
for
AT5G37475

.
ath-u.5
for
AT1G66070

.
gma-u.5
for
100783973

.
gma-u.5
for
100775181

.
sly-u.5
for
101255357

.
vvi-u.5
for
100242541

.
ppo-u.5
for
7493579

.
ppo-u.5
for
18106562

.
mtr-u.5
for
25497362

.


Ortholog ID: 3982
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G66070 AT5G37475 LOC100775181 LOC100783973 LOC101255357 LOC4339203 LOC4328129 LOC100283402 LOC100283844 LOC103852306 LOC103831084 LOC100242541 LOC18106562 LOC7493579 LOC25497362 LOC123135849 LOC123143372 LOC123402047 LOC107911951 LOC107940913 LOC106446340 LOC106381334 CHLRE_06g308850v5 LOC8055041 LOC102592326 LOC102610104 LOC100834330 LOC107831054 LOC107760667
Function* Translation initiation factor eIF3 subunit Translation initiation factor eIF3 subunit eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J uncharacterized LOC101255357 uncharacterized LOC4339203 uncharacterized LOC4328129 eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa uncharacterized LOC100283844 eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J uncharacterized LOC100242541 uncharacterized LOC18106562 uncharacterized LOC7493579 eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A-like eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J uncharacterized protein eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A uncharacterized LOC102610104 eukaryotic translation initiation factor 3 subunit J-A uncharacterized LOC107831054 uncharacterized LOC107760667
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra04075 Plant hormone signal transduction 2
bra00020 Citrate cycle (TCA cycle) 2
bra00310 Lysine degradation 2
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae04141 Protein processing in endoplasmic reticulum 4
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 5
hvu01200 Carbon metabolism 5
hvu00270 Cysteine and methionine metabolism 4
hvu00710 Carbon fixation by Calvin cycle 4
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842921 833725 100775181 100783973 101255357 4339203 4328129 100283402 100283844 103852306 103831084 100242541 18106562 7493579 25497362 123135849 123143372 123402047 107911951 107940913 106446340 106381334 5716834 8055041 102592326 102610104 100834330 107831054 107760667
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