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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055065   3-isopropylmalate dehydratase large subunit, chloroplastic 
 zma-u.5   100193712   uncharacterized LOC100193712 
 zma-u.5   100284902   3-isopropylmalate dehydratase large subunit 2 
 osa-u.5   4328147   3-isopropylmalate dehydratase large subunit, chloroplastic 
 ath-u.5   IIL1   isopropyl malate isomerase large subunit 1 
 gma-u.5   100787098   3-isopropylmalate dehydratase large subunit, chloroplastic 
 gma-u.5   100811656   3-isopropylmalate dehydratase large subunit, chloroplastic 
 gma-u.5   100780547   3-isopropylmalate dehydratase large subunit, chloroplastic 
 sly-u.5   101266391   3-isopropylmalate dehydratase large subunit, chloroplastic 
 sly-u.5   101244614   3-isopropylmalate dehydratase large subunit, chloroplastic 
 vvi-u.5   100251885   3-isopropylmalate dehydratase large subunit, chloroplastic 
 vvi-u.5   100251128   3-isopropylmalate dehydratase large subunit, chloroplastic 
 ppo-u.5   7475426   3-isopropylmalate dehydratase large subunit, chloroplastic 
 mtr-u.5   11434985   3-isopropylmalate dehydratase large subunit, chloroplastic 
 mtr-u.5   11432785   3-isopropylmalate dehydratase large subunit, chloroplastic 

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Top 50 coexpressed genes to 8055065 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055065 (sbi-r.1 coexpression data)

CoexMap"8055065"


sbiLOC8055065 | Entrez gene ID : 8055065      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 3 2 2 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00290 [list] [network] Valine, leucine and isoleucine biosynthesis (16 genes)
sbi00660 [list] [network] C5-Branched dibasic acid metabolism (6 genes)
sbi00966 [list] [network] Glucosinolate biosynthesis (7 genes)
sbi01210 [list] [network] 2-Oxocarboxylic acid metabolism (77 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0008652 [list] [network] amino acid biosynthetic process  (141 genes)  IEA  
GO CC
GO MF
GO:0003861 [list] [network] 3-isopropylmalate dehydratase activity  (1 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (26 genes)  IEA  
Protein XP_002453237.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 2  (predict for XP_002453237.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002453237.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055065

.
zma-u.5
for
100193712

.
zma-u.5
for
100284902

.
osa-u.5
for
4328147

.
ath-u.5
for
IIL1

.
gma-u.5
for
100787098

.
gma-u.5
for
100811656

.
gma-u.5
for
100780547

.
sly-u.5
for
101266391

.
sly-u.5
for
101244614

.
vvi-u.5
for
100251885

.
vvi-u.5
for
100251128

.
ppo-u.5
for
7475426

.
mtr-u.5
for
11434985

.
mtr-u.5
for
11432785

.


Ortholog ID: 5140
Species ath gma gma sly sly osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol IIL1 LOC100780547 LOC100811656 LOC101244614 LOC101266391 LOC4328147 LOC100193712 LOC100284902 LOC103833397 LOC103863631 LOC100251885 LOC100251128 LOC7475426 LOC11432785 LOC11434985 LOC123044105 LOC123143470 LOC123401438 LOC107930430 LOC107929168 LOC106381416 LOC106426997 CHLRE_01g004500v5 LOC8055065 LOC102602969 LOC102613284 LOC100844388 LOC107788624 LOC107788625
Function* isopropyl malate isomerase large subunit 1 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic uncharacterized LOC100193712 3-isopropylmalate dehydratase large subunit 2 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic uncharacterized protein 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit-like 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic 3-isopropylmalate dehydratase large subunit, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 9
ath01210 2-Oxocarboxylic acid metabolism 9
ath01230 Biosynthesis of amino acids 7
ath00290 Valine, leucine and isoleucine biosynthesis 6
ath00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 6
gma00290 Valine, leucine and isoleucine biosynthesis 5
gma00660 C5-Branched dibasic acid metabolism 5
gma01210 2-Oxocarboxylic acid metabolism 5
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly01210 2-Oxocarboxylic acid metabolism 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00660 C5-Branched dibasic acid metabolism 2
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 10
osa01200 Carbon metabolism 4
osa01210 2-Oxocarboxylic acid metabolism 4
osa00710 Carbon fixation by Calvin cycle 3
osa00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma00660 C5-Branched dibasic acid metabolism 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01230 Biosynthesis of amino acids 4
zma00966 Glucosinolate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma04141 Protein processing in endoplasmic reticulum 3
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00966 Glucosinolate biosynthesis 7
bra01210 2-Oxocarboxylic acid metabolism 7
bra00920 Sulfur metabolism 4
bra00290 Valine, leucine and isoleucine biosynthesis 4
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 7
bra00270 Cysteine and methionine metabolism 6
bra00920 Sulfur metabolism 4
bra01200 Carbon metabolism 3
bra01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi00030 Pentose phosphate pathway 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 3
ppo01200 Carbon metabolism 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 6
mtr00230 Purine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 10
tae01210 2-Oxocarboxylic acid metabolism 10
tae01230 Biosynthesis of amino acids 10
tae00660 C5-Branched dibasic acid metabolism 7
tae00966 Glucosinolate biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00290 Valine, leucine and isoleucine biosynthesis 10
tae01210 2-Oxocarboxylic acid metabolism 10
tae00660 C5-Branched dibasic acid metabolism 7
tae00966 Glucosinolate biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu01230 Biosynthesis of amino acids 5
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu01200 Carbon metabolism 2
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00300 Lysine biosynthesis 5
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi00261 Monobactam biosynthesis 3
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00300 Lysine biosynthesis 5
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi00261 Monobactam biosynthesis 3
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna00966 Glucosinolate biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna00966 Glucosinolate biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre01240 Biosynthesis of cofactors 4
cre00970 Aminoacyl-tRNA biosynthesis 3
cre00290 Valine, leucine and isoleucine biosynthesis 3
cre01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
sbi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 6
sot01200 Carbon metabolism 3
sot00750 Vitamin B6 metabolism 3
sot00190 Oxidative phosphorylation 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi01200 Carbon metabolism 3
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi00190 Oxidative phosphorylation 2
bdi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 6
nta01210 2-Oxocarboxylic acid metabolism 6
nta01230 Biosynthesis of amino acids 6
nta00270 Cysteine and methionine metabolism 4
nta00660 C5-Branched dibasic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 4
nta00660 C5-Branched dibasic acid metabolism 4
nta00966 Glucosinolate biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826975 100780547 100811656 101244614 101266391 4328147 100193712 100284902 103833397 103863631 100251885 100251128 7475426 11432785 11434985 123044105 123143470 123401438 107930430 107929168 106381416 106426997 5727675 8055065 102602969 102613284 100844388 107788624 107788625
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