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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055934   glutamate dehydrogenase 2, mitochondrial 
 zma-u.5   100193614   glutamic dehydrogenase2 
 zma-u.5   542220   glutamic dehydrogenase 1 
 osa-u.5   4334405   glutamate dehydrogenase 1, mitochondrial-like 
 osa-u.5   4336554   glutamate dehydrogenase 2, mitochondrial-like 
 ath-u.5   GDH1   glutamate dehydrogenase 1 
 ath-u.5   GDH2   glutamate dehydrogenase 2 
 gma-u.5   100777869   glutamate dehydrogenase 1 
 gma-u.5   100801250   glutamate dehydrogenase 2 
 gma-u.5   100801991   glutamate dehydrogenase 1 
 sly-u.5   101246116   glutamate dehydrogenase 
 sly-u.5   101252088   glutamate dehydrogenase A-like 
 vvi-u.5   GDHB   GDHB glutamate dehydrogenase 
 vvi-u.5   100263048   glutamate dehydrogenase 
 vvi-u.5   100257914   glutamate dehydrogenase 
 ppo-u.5   7482352   glutamate dehydrogenase 1 
 ppo-u.5   7456680   glutamate dehydrogenase 2 
 ppo-u.5   7469881   glutamate dehydrogenase 1 
 mtr-u.5   11433210   glutamate dehydrogenase 2 
 mtr-u.5   11414500   probable glutamate dehydrogenase 3 
 mtr-u.5   25498983   glutamate dehydrogenase 1 

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Top 50 coexpressed genes to 8055934 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055934 (sbi-r.1 coexpression data)

CoexMap"8055934"


sbiLOC8055934 | Entrez gene ID : 8055934      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00220 [list] [network] Arginine biosynthesis (33 genes)
sbi00250 [list] [network] Alanine, aspartate and glutamate metabolism (49 genes)
sbi00910 [list] [network] Nitrogen metabolism (32 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
GO BP
GO:0006538 [list] [network] L-glutamate catabolic process  (7 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0004352 [list] [network] glutamate dehydrogenase (NAD+) activity  (2 genes)  IEA  
Protein XP_002446878.1 [sequence] [blastp]
XP_021319016.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_002446878.1)
mito 5,  chlo_mito 4,  chlo 2,  cyto 2  (predict for XP_021319016.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002446878.1)
mito 6  (predict for XP_021319016.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055934

.
zma-u.5
for
100193614

.
zma-u.5
for
542220

.
osa-u.5
for
4334405

.
osa-u.5
for
4336554

.
ath-u.5
for
GDH1

.
ath-u.5
for
GDH2

.
gma-u.5
for
100777869

.
gma-u.5
for
100801250

.
gma-u.5
for
100801991

.
sly-u.5
for
101246116

.
sly-u.5
for
101252088

.
vvi-u.5
for
GDHB

.
vvi-u.5
for
100263048

.
vvi-u.5
for
100257914

.
ppo-u.5
for
7482352

.
ppo-u.5
for
7456680

.
ppo-u.5
for
7469881

.
mtr-u.5
for
11433210

.
mtr-u.5
for
11414500

.
mtr-u.5
for
25498983

.


Ortholog ID: 1149
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GDH2 LOC100789509 GDH1 gdh1 LOC101246116 LOC4334405 LOC4336554 LOC542220 LOC100193614 LOC103828225 LOC103855367 GDHB LOC100257914 LOC18103847 LOC7469881 LOC25493591 LOC25498983 LOC100682519 LOC123046199 LOC123427402 LOC123452653 LOC107899137 LOC107933490 LOC106445317 LOC106422789 CHLRE_05g232150v5 LOC8055934 LOC110433762 LOC102585678 LOC102589055 LOC102620167 LOC102626102 LOC100828452 LOC100831066 LOC107762966 LOC107765542
Function* glutamate dehydrogenase 2 glutamate dehydrogenase 1-like glutamate dehydrogenase 1 glutamate dehydrogenase glutamate dehydrogenase glutamate dehydrogenase 1, mitochondrial-like glutamate dehydrogenase 2, mitochondrial-like glutamic dehydrogenase 1 glutamic dehydrogenase2 probable glutamate dehydrogenase 3 probable glutamate dehydrogenase 3 GDHB glutamate dehydrogenase glutamate dehydrogenase glutamate dehydrogenase 2 glutamate dehydrogenase 1 glutamate dehydrogenase 2 glutamate dehydrogenase 1 glutamate dehydrogenase 1, mitochondrial glutamate dehydrogenase 2, mitochondrial glutamate dehydrogenase 2, mitochondrial glutamate dehydrogenase 1, mitochondrial probable glutamate dehydrogenase 3 glutamate dehydrogenase 2 probable glutamate dehydrogenase 3 glutamate dehydrogenase 2 uncharacterized protein glutamate dehydrogenase 2, mitochondrial glutamate dehydrogenase glutamate dehydrogenase glutamate dehydrogenase A-like glutamate dehydrogenase 1 glutamate dehydrogenase 2 glutamate dehydrogenase 2, mitochondrial glutamate dehydrogenase 1, mitochondrial glutamate dehydrogenase B-like glutamate dehydrogenase A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00330 Arginine and proline metabolism 3
ath00052 Galactose metabolism 2
ath00220 Arginine biosynthesis 2
ath00250 Alanine, aspartate and glutamate metabolism 2
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 4
gma01200 Carbon metabolism 4
gma00280 Valine, leucine and isoleucine degradation 3
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 3
sly01250 Biosynthesis of nucleotide sugars 3
sly00330 Arginine and proline metabolism 3
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00500 Starch and sucrose metabolism 5
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa01200 Carbon metabolism 3
osa00270 Cysteine and methionine metabolism 2
osa01230 Biosynthesis of amino acids 2
osa00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 2
osa00410 beta-Alanine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00030 Pentose phosphate pathway 3
zma00480 Glutathione metabolism 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
bra00220 Arginine biosynthesis 3
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi01240 Biosynthesis of cofactors 4
vvi00250 Alanine, aspartate and glutamate metabolism 3
vvi00910 Nitrogen metabolism 3
vvi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00220 Arginine biosynthesis 3
ppo00250 Alanine, aspartate and glutamate metabolism 3
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00220 Arginine biosynthesis 3
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00500 Starch and sucrose metabolism 3
mtr00710 Carbon fixation by Calvin cycle 3
mtr00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00350 Tyrosine metabolism 3
tae00360 Phenylalanine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 7
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu00500 Starch and sucrose metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01200 Carbon metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04075 Plant hormone signal transduction 2
hvu04626 Plant-pathogen interaction 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00220 Arginine biosynthesis 6
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi00910 Nitrogen metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 6
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi00910 Nitrogen metabolism 6
ghi01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 5
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00910 Nitrogen metabolism 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 6
bna00250 Alanine, aspartate and glutamate metabolism 6
bna00910 Nitrogen metabolism 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
cre00280 Valine, leucine and isoleucine degradation 2
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre00350 Tyrosine metabolism 2
cre00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00071 Fatty acid degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00592 alpha-Linolenic acid metabolism 2
sbi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 3
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00010 Glycolysis / Gluconeogenesis 5
sot00710 Carbon fixation by Calvin cycle 4
sot01230 Biosynthesis of amino acids 4
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03082 ATP-dependent chromatin remodeling 2
sot00220 Arginine biosynthesis 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 6
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00040 Pentose and glucuronate interconversions 2
bdi00053 Ascorbate and aldarate metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
nta01200 Carbon metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 8
nta00220 Arginine biosynthesis 6
nta00250 Alanine, aspartate and glutamate metabolism 6
nta00910 Nitrogen metabolism 6
nta00920 Sulfur metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830635 100789509 547687 544015 101246116 4334405 4336554 542220 100193614 103828225 103855367 100232993 100257914 18103847 7469881 25493591 25498983 100682519 123046199 123427402 123452653 107899137 107933490 106445317 106422789 5727809 8055934 110433762 102585678 102589055 102620167 102626102 100828452 100831066 107762966 107765542
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