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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056407   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 zma-u.5   100272787   uncharacterized LOC100272787 
 osa-u.5   4333096   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ath-u.5   CLPP6   CLP protease proteolytic subunit 6 
 gma-u.5   100799710   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 gma-u.5   100796744   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 sly-u.5   543966   clp-like energy-dependent protease 
 vvi-u.5   100852857   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ppo-u.5   7469984   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ppo-u.5   7464042   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 mtr-u.5   11412973   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 

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Top 50 coexpressed genes to 8056407 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056407 (sbi-r.1 coexpression data)

CoexMap"8056407"


sbiLOC8056407 | Entrez gene ID : 8056407      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (16 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (10 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (13 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (26 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (118 genes)  IEA  
Protein XP_002454733.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002454733.1)
Subcellular
localization
TargetP
chlo 9,  mito 4  (predict for XP_002454733.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056407

.
zma-u.5
for
100272787

.
osa-u.5
for
4333096

.
ath-u.5
for
CLPP6

.
gma-u.5
for
100799710

.
gma-u.5
for
100796744

.
sly-u.5
for
543966

.
vvi-u.5
for
100852857

.
ppo-u.5
for
7469984

.
ppo-u.5
for
7464042

.
mtr-u.5
for
11412973

.


Ortholog ID: 7791
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CLPP6 LOC100796744 LOC100799710 LOC543966 LOC4333096 LOC100272787 LOC103836208 LOC103843228 LOC100852857 LOC7464042 LOC7469984 LOC11412973 LOC100415860 LOC123085952 LOC123448508 LOC107886985 LOC107898767 LOC106415400 LOC106362167 CHLRE_06g299650v5 LOC8056407 LOC102589998 LOC102614581 LOC100832682 LOC107801881 LOC107811365
Function* CLP protease proteolytic subunit 6 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic clp-like energy-dependent protease ATP-dependent Clp protease proteolytic subunit 6, chloroplastic uncharacterized LOC100272787 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic uncharacterized protein ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00785 Lipoic acid metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03010 Ribosome 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi03010 Ribosome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 4
cit00900 Terpenoid backbone biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837719 100796744 100799710 543966 4333096 100272787 103836208 103843228 100852857 7464042 7469984 11412973 100415860 123085952 123448508 107886985 107898767 106415400 106362167 5716994 8056407 102589998 102614581 100832682 107801881 107811365
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