Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8057073   KH domain-containing protein SPIN1 
 zma-u.5   100283658   nucleic acid binding protein 
 zma-u.5   100282540   nucleic acid binding protein 
 zma-u.5   100272497   KH domain-containing protein SPIN1 
 osa-u.5   4334557   KH domain-containing protein SPIN1-like 
 osa-u.5   4342758   KH domain-containing protein SPIN1-like 
 ath-u.5   AT2G38610   RNA-binding KH domain-containing protein 
 ath-u.5   AT3G08620   RNA-binding KH domain-containing protein 
 gma-u.5   100816420   KH domain-containing protein At2g38610 
 gma-u.5   100797384   KH domain-containing protein At2g38610 
 gma-u.5   100791899   KH domain-containing protein At2g38610 
 sly-u.5   101268791   KH domain-containing protein At2g38610 
 sly-u.5   101259991   KH domain-containing protein At3g08620 
 vvi-u.5   100245080   KH domain-containing protein At3g08620 
 vvi-u.5   100263936   KH domain-containing protein At2g38610 
 ppo-u.5   7464745   KH domain-containing protein At3g08620 
 ppo-u.5   18100022   KH domain-containing protein At2g38610 
 ppo-u.5   7498113   KH domain-containing protein At3g08620 
 mtr-u.5   11436419   KH domain-containing protein At2g38610 
 mtr-u.5   11437020   KH domain-containing protein At2g38610 

close


Top 50 coexpressed genes to 8057073 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8057073 (sbi-r.1 coexpression data)

CoexMap"8057073"


sbiLOC8057073 | Entrez gene ID : 8057073      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002466215.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  cyto_nucl 3  (predict for XP_002466215.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for XP_002466215.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8057073

.
zma-u.5
for
100283658

.
zma-u.5
for
100282540

.
zma-u.5
for
100272497

.
osa-u.5
for
4334557

.
osa-u.5
for
4342758

.
ath-u.5
for
AT2G38610

.
ath-u.5
for
AT3G08620

.
gma-u.5
for
100816420

.
gma-u.5
for
100797384

.
gma-u.5
for
100791899

.
sly-u.5
for
101268791

.
sly-u.5
for
101259991

.
vvi-u.5
for
100245080

.
vvi-u.5
for
100263936

.
ppo-u.5
for
7464745

.
ppo-u.5
for
18100022

.
ppo-u.5
for
7498113

.
mtr-u.5
for
11436419

.
mtr-u.5
for
11437020

.


Ortholog ID: 3090
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT2G38610 AT3G08620 LOC100816420 LOC100791899 LOC101268791 LOC101259991 LOC4334557 LOC4342758 LOC100283658 LOC100272497 LOC103857794 LOC103870608 LOC100263936 LOC100245080 LOC7464745 LOC18100022 LOC11436419 LOC11437020 LOC123105608 LOC123113927 LOC123452955 LOC107896839 LOC107914513 LOC106450962 LOC106407465 LOC8069125 LOC8057073 LOC102589717 LOC102590377 LOC102617293 LOC100823908 LOC100842113 LOC107828770 LOC107804870
Function* RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein SPIN1-like KH domain-containing protein SPIN1-like nucleic acid binding protein KH domain-containing protein SPIN1 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein At2g38610-like KH domain-containing protein At3g08620 KH domain-containing protein At3g08620 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03060 Protein export 3
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04120 Ubiquitin mediated proteolysis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly00620 Pyruvate metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03013 Nucleocytoplasmic transport 4
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818443 820009 100816420 100791899 101268791 101259991 4334557 4342758 100283658 100272497 103857794 103870608 100263936 100245080 7464745 18100022 11436419 11437020 123105608 123113927 123452955 107896839 107914513 106450962 106407465 8069125 8057073 102589717 102590377 102617293 100823908 100842113 107828770 107804870
The preparation time of this page was 0.1 [sec].