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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8057650   uroporphyrinogen-III synthase, chloroplastic 
 zma-u.5   100192907   uncharacterized LOC100192907 
 osa-u.5   4331869   uroporphyrinogen-III synthase, chloroplastic-like 
 ath-u.5   HEMD   uroporphyrinogen-III synthase family protein 
 gma-u.5   100808086   uroporphyrinogen-III synthase, chloroplastic 
 sly-u.5   101262008   uroporphyrinogen-III synthase, chloroplastic 
 vvi-u.5   100250675   uroporphyrinogen-III synthase, chloroplastic 
 ppo-u.5   18104938   uroporphyrinogen-III synthase, chloroplastic 
 mtr-u.5   11423221   uroporphyrinogen-III synthase, chloroplastic 

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Top 50 coexpressed genes to 8057650 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8057650 (sbi-r.1 coexpression data)

CoexMap"8057650"


sbiLOC8057650 | Entrez gene ID : 8057650      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00860 [list] [network] Porphyrin metabolism (54 genes)
sbi01240 [list] [network] Biosynthesis of cofactors (256 genes)
GO BP
GO:0006780 [list] [network] uroporphyrinogen III biosynthetic process  (1 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0004852 [list] [network] uroporphyrinogen-III synthase activity  (2 genes)  IEA  
Protein XP_002468373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002468373.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002468373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8057650

.
zma-u.5
for
100192907

.
osa-u.5
for
4331869

.
ath-u.5
for
HEMD

.
gma-u.5
for
100808086

.
sly-u.5
for
101262008

.
vvi-u.5
for
100250675

.
ppo-u.5
for
18104938

.
mtr-u.5
for
11423221

.


Ortholog ID: 10006
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol HEMD LOC100808086 LOC101262008 LOC4331869 LOC100192907 LOC103842139 LOC100250675 LOC18104938 LOC11423221 LOC123084682 LOC123093428 LOC123449648 LOC107940688 LOC107958097 LOC106363671 LOC106415229 CHLRE_09g409100v5 LOC8057650 LOC102585870 LOC102581448 LOC102622450 LOC100827314 LOC107763502 LOC107827902
Function* uroporphyrinogen-III synthase family protein uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic-like uncharacterized LOC100192907 uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uncharacterized protein uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic-like uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic uroporphyrinogen-III synthase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 6
ath01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly01240 Biosynthesis of cofactors 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 6
ppo01200 Carbon metabolism 6
ppo00010 Glycolysis / Gluconeogenesis 5
ppo00061 Fatty acid biosynthesis 5
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00860 Porphyrin metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 4
bna03015 mRNA surveillance pathway 2
bna00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 7
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 4
sot01240 Biosynthesis of cofactors 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817195 100808086 101262008 4331869 100192907 103842139 100250675 18104938 11423221 123084682 123093428 123449648 107940688 107958097 106363671 106415229 5722253 8057650 102585870 102581448 102622450 100827314 107763502 107827902
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