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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8057890   probable transcription factor GLK1 
 zma-u.5   541882   G2-like 1 
 zma-u.5   542493   golden plant 2 
 osa-u.5   4326363   probable transcription factor GLK2 
 osa-u.5   4340977   probable transcription factor GLK1 
 ath-u.5   GPRI1   GBF's pro-rich region-interacting factor 1 
 ath-u.5   GLK2   GOLDEN2-like 2 
 gma-u.5   100799248   transcription activator GLK1-like 
 gma-u.5   100790591   transcription activator GLK1 
 gma-u.5   100775671   transcription activator GLK1 
 sly-u.5   GLK1   golden1-like protein 
 sly-u.5   GLK2   transcription factor GLK2 
 vvi-u.5   100260852   transcription activator GLK1 
 ppo-u.5   18106803   transcription activator GLK1 
 ppo-u.5   7469566   transcription activator GLK1 
 mtr-u.5   11444987   probable transcription factor GLK1 
 mtr-u.5   25487700   probable transcription factor GLK1 

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Top 50 coexpressed genes to 8057890 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8057890 (sbi-r.1 coexpression data)

CoexMap"8057890"


sbiLOC8057890 | Entrez gene ID : 8057890      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (210 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (353 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1111 genes)  IEA  
Protein XP_002436765.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3  (predict for XP_002436765.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002436765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8057890

.
zma-u.5
for
541882

.
zma-u.5
for
542493

.
osa-u.5
for
4326363

.
osa-u.5
for
4340977

.
ath-u.5
for
GPRI1

.
ath-u.5
for
GLK2

.
gma-u.5
for
100799248

.
gma-u.5
for
100790591

.
gma-u.5
for
100775671

.
sly-u.5
for
GLK1

.
sly-u.5
for
GLK2

.
vvi-u.5
for
100260852

.
ppo-u.5
for
18106803

.
ppo-u.5
for
7469566

.
mtr-u.5
for
11444987

.
mtr-u.5
for
25487700

.


Ortholog ID: 3078
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol GLK2 GPRI1 LOC100799248 LOC100790591 GLK1 GLK2 LOC4326363 LOC4340977 LOC542493 LOC541882 LOC103842594 LOC103848864 LOC100260852 LOC18106803 LOC7469566 LOC25487700 LOC11444987 LOC123077934 LOC123168849 LOC123411544 LOC123443300 LOC107898977 LOC107933038 LOC106368781 LOC106357550 LOC8057890 LOC8078076 LOC102587163 LOC102593464 LOC102618104 LOC100821188 LOC100831717 LOC107807885 LOC107801247
Function* GOLDEN2-like 2 GBF's pro-rich region-interacting factor 1 transcription activator GLK1-like transcription activator GLK1 golden1-like protein transcription factor GLK2 probable transcription factor GLK2 probable transcription factor GLK1 golden plant 2 G2-like 1 transcription activator GLK1 transcription activator GLK2 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 probable transcription factor GLK1 probable transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK1 probable transcription factor GLK1 probable transcription factor GLK2 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1-like probable transcription factor GLK1 probable transcription factor GLK2 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1 probable transcription factor GLK2 probable transcription factor GLK1 transcription activator GLK1 putative transcription factor GLK1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
bra00950 Isoquinoline alkaloid biosynthesis 2
bra00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 3
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 5
bdi00900 Terpenoid backbone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04148 Efferocytosis 2
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta00940 Phenylpropanoid biosynthesis 4
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834442 816579 100799248 100790591 101055587 101055613 4326363 4340977 542493 541882 103842594 103848864 100260852 18106803 7469566 25487700 11444987 123077934 123168849 123411544 123443300 107898977 107933038 106368781 106357550 8057890 8078076 102587163 102593464 102618104 100821188 100831717 107807885 107801247
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