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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8058223  HD domain-containing protein 2 homolog 
 zma-u.5  100281836  uncharacterized LOC100281836 
 zma-u.5  100284692  HD domain containing protein 
 osa-u.5  4326555  uncharacterized LOC4326555 
 osa-u.5  4328498  uncharacterized LOC4328498 
 ath-u.5  AT2G23820  Metal-dependent phosphohydrolase 
 ath-u.5  AT1G26160  Metal-dependent phosphohydrolase 
 gma-u.5  100784513  5'-deoxynucleotidase hdd1 
 gma-u.5  100798792  5'-deoxynucleotidase HDDC2 
 gma-u.5  100819398  5'-deoxynucleotidase HDDC2 
 sly-u.5  101257084  uncharacterized LOC101257084 
 sly-u.5  101246425  uncharacterized LOC101246425 
 vvi-u.5  104878955  uncharacterized LOC104878955 
 vvi-u.5  100267908  uncharacterized LOC100267908 
 vvi-u.5  100260974  uncharacterized LOC100260974 
 ppo-u.5  7485934  uncharacterized LOC7485934 
 ppo-u.5  7465985  uncharacterized LOC7465985 
 mtr-u.5  25480606  5'-deoxynucleotidase HDDC2 
 mtr-u.5  25494276  5'-deoxynucleotidase HDDC2 
 mtr-u.5  25494275  5'-deoxynucleotidase HDDC2 

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Top 50 coexpressed genes to 8058223 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058223 (sbi-r.1 coexpression data)

CoexMap"8058223"


sbiLOC8058223 | Entrez gene ID : 8058223
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00230 [list] [network] Purine metabolism (97 genes)
sbi00240 [list] [network] Pyrimidine metabolism (66 genes)
sbi01232 [list] [network] Nucleotide metabolism (80 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0002953 [list] [network] 5'-deoxynucleotidase activity  (2 genes)  IEA  
Protein XP_002456036.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_002456036.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_002456036.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8058223

.

zma-u.5
for
100281836

.

zma-u.5
for
100284692

.

osa-u.5
for
4326555

.

osa-u.5
for
4328498

.

ath-u.5
for
AT2G23820

.

ath-u.5
for
AT1G26160

.

gma-u.5
for
100784513

.

gma-u.5
for
100798792

.

gma-u.5
for
100819398

.

sly-u.5
for
101257084

.

sly-u.5
for
101246425

.

vvi-u.5
for
104878955

.

vvi-u.5
for
100267908

.

vvi-u.5
for
100260974

.

ppo-u.5
for
7485934

.

ppo-u.5
for
7465985

.

mtr-u.5
for
25480606

.

mtr-u.5
for
25494276

.

mtr-u.5
for
25494275

.


Ortholog ID: 2790
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G23820 AT1G26160 LOC100798792 LOC100789619 LOC101257084 LOC101246425 LOC4328498 LOC4326555 LOC100284692 LOC100281836 LOC103835474 LOC100260381 LOC104878955 LOC7465985 LOC7485934 LOC25494275 LOC25494276 LOC123070209 LOC123136566 LOC123402595 LOC123443958 LOC107899688 LOC107957134 LOC106446609 LOC106361916 CHLRE_06g265900v5 LOC110435096 LOC8058223 LOC102591421 LOC102594556 LOC102612387 LOC102630332 LOC100823883 LOC100825516 LOC107817745 LOC107800937
Function* Metal-dependent phosphohydrolase Metal-dependent phosphohydrolase 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase hdd1 uncharacterized LOC101257084 uncharacterized LOC101246425 uncharacterized LOC4328498 uncharacterized LOC4326555 HD domain containing protein uncharacterized LOC100281836 HD domain-containing protein 2 homolog uncharacterized LOC100260381 uncharacterized LOC104878955 uncharacterized LOC7465985 uncharacterized LOC7485934 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2-like 5'-deoxynucleotidase HDDC2-like 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 5'-deoxynucleotidase HDDC2 uncharacterized protein HD domain-containing protein 2 homolog HD domain-containing protein 2 homolog HD domain-containing protein 2-like HD domain-containing protein 2 uncharacterized LOC102612387 uncharacterized LOC102630332 HD domain-containing protein 2 HD domain-containing protein 2 uncharacterized LOC107817745 uncharacterized LOC107800937
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath00230 Purine metabolism 2
ath00730 Thiamine metabolism 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma04148 Efferocytosis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra00230 Purine metabolism 3
bra01232 Nucleotide metabolism 3
bra00730 Thiamine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00380 Tryptophan metabolism 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu00020 Citrate cycle (TCA cycle) 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi03018 RNA degradation 3
ghi00061 Fatty acid biosynthesis 2
ghi00620 Pyruvate metabolism 2
ghi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi00620 Pyruvate metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 5
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna01232 Nucleotide metabolism 4
bna00061 Fatty acid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01230 Biosynthesis of amino acids 2
sbi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03040 Spliceosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot00970 Aminoacyl-tRNA biosynthesis 3
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00240 Pyrimidine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00380 Tryptophan metabolism 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00071 Fatty acid degradation 2
bdi00350 Tyrosine metabolism 2
bdi00620 Pyruvate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00190 Oxidative phosphorylation 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00340 Histidine metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816914 839157 100798792 100789619 101257084 101246425 4328498 4326555 100284692 100281836 103835474 100260381 104878955 7465985 7485934 25494275 25494276 123070209 123136566 123402595 123443958 107899688 107957134 106446609 106361916 5721946 110435096 8058223 102591421 102594556 102612387 102630332 100823883 100825516 107817745 107800937
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