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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058407   isoleucine--tRNA ligase, cytoplasmic 
 zma-u.5   100384866   isoleucine--tRNA ligase, cytoplasmic 
 zma-u.5   100273774   Isoleucine--tRNA ligase cytoplasmic 
 osa-u.5   9270869   isoleucine--tRNA ligase, cytoplasmic 
 ath-u.5   AT4G10320   tRNA synthetase class I (I, L, M and V) family protein 
 gma-u.5   100809292   isoleucine--tRNA ligase, cytoplasmic 
 gma-u.5   100791830   isoleucine--tRNA ligase, cytoplasmic 
 sly-u.5   101253854   isoleucine--tRNA ligase, cytoplasmic 
 vvi-u.5   100250847   isoleucine--tRNA ligase, cytoplasmic 
 ppo-u.5   18106949   isoleucine--tRNA ligase, cytoplasmic 
 ppo-u.5   7469599   isoleucine--tRNA ligase, cytoplasmic 
 mtr-u.5   11439215   isoleucine--tRNA ligase, cytoplasmic 

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Top 50 coexpressed genes to 8058407 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058407 (sbi-r.1 coexpression data)

CoexMap"8058407"


sbiLOC8058407 | Entrez gene ID : 8058407    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00970 [list] [network] Aminoacyl-tRNA biosynthesis (105 genes)
GO BP
GO:0006428 [list] [network] isoleucyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO MF
GO:0004822 [list] [network] isoleucine-tRNA ligase activity  (3 genes)  IEA  
GO:0002161 [list] [network] aminoacyl-tRNA deacylase activity  (16 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (27 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_021304963.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  E.R. 2,  chlo 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_021304963.1)
Subcellular
localization
TargetP
other 9  (predict for XP_021304963.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058407

.
zma-u.5
for
100384866

.
zma-u.5
for
100273774

.
osa-u.5
for
9270869

.
ath-u.5
for
AT4G10320

.
gma-u.5
for
100809292

.
gma-u.5
for
100791830

.
sly-u.5
for
101253854

.
vvi-u.5
for
100250847

.
ppo-u.5
for
18106949

.
ppo-u.5
for
7469599

.
mtr-u.5
for
11439215

.


Ortholog ID: 7646
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT4G10320 LOC100791830 LOC100809292 LOC101253854 LOC9270869 LOC100384866 LOC100273774 LOC103861295 LOC103864125 LOC100250847 LOC7469599 LOC18106949 LOC11439215 LOC123155529 LOC123169893 LOC123407557 LOC107939671 LOC107938948 LOC106442768 LOC106446320 CHLRE_16g651750v5 LOC8082695 LOC8058407 LOC102600166 LOC102621177 LOC100833154 LOC107765258 LOC107819118
Function* tRNA synthetase class I (I, L, M and V) family protein isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic Isoleucine--tRNA ligase cytoplasmic isoleucine--tRNA ligase, cytoplasmic-like isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic uncharacterized protein isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic isoleucine--tRNA ligase, cytoplasmic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03018 RNA degradation 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly03040 Spliceosome 3
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma00970 Aminoacyl-tRNA biosynthesis 4
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma03008 Ribosome biogenesis in eukaryotes 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra03010 Ribosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04142 Lysosome 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr04142 Lysosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 9
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03440 Homologous recombination 2
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03040 Spliceosome 2
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 6
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826624 100791830 100809292 101253854 9270869 100384866 100273774 103861295 103864125 100250847 7469599 18106949 11439215 123155529 123169893 123407557 107939671 107938948 106442768 106446320 5723789 8082695 8058407 102600166 102621177 100833154 107765258 107819118
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