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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058459   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 zma-u.5   100282239   dihydrodipicolinate synthase 2 
 zma-u.5   542379   dihydrodipicolinate synthase 1 
 osa-u.5   4335317   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 ath-u.5   DHDPS1   dihydrodipicolinate synthase 1 
 ath-u.5   DHDPS2   dihydrodipicolinate synthase 
 gma-u.5   100788930   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 gma-u.5   100806626   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 gma-u.5   DHPS1   dihydrodipicolinate synthase 
 sly-u.5   101250558   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 sly-u.5   101250089   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 
 vvi-u.5   100262665   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ppo-u.5   7488907   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ppo-u.5   7461723   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   25501009   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   25501008   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   11430086   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 

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Top 50 coexpressed genes to 8058459 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058459 (sbi-r.1 coexpression data)

CoexMap"8058459"


sbiLOC8058459 | Entrez gene ID : 8058459      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 3 2 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00261 [list] [network] Monobactam biosynthesis (11 genes)
sbi00300 [list] [network] Lysine biosynthesis (15 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (10 genes)  IEA  
GO CC
GO MF
GO:0008840 [list] [network] 4-hydroxy-tetrahydrodipicolinate synthase activity  (2 genes)  IEA  
Protein XP_002437401.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002437401.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002437401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058459

.
zma-u.5
for
100282239

.
zma-u.5
for
542379

.
osa-u.5
for
4335317

.
ath-u.5
for
DHDPS1

.
ath-u.5
for
DHDPS2

.
gma-u.5
for
100788930

.
gma-u.5
for
100806626

.
gma-u.5
for
DHPS1

.
sly-u.5
for
101250558

.
sly-u.5
for
101250089

.
vvi-u.5
for
100262665

.
ppo-u.5
for
7488907

.
ppo-u.5
for
7461723

.
mtr-u.5
for
25501009

.
mtr-u.5
for
25501008

.
mtr-u.5
for
11430086

.


Ortholog ID: 3566
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol DHDPS1 DHDPS2 LOC100788930 LOC100806626 LOC101250089 LOC101250558 LOC4335317 LOC100282239 LOC542379 LOC103866894 LOC103862855 LOC100262665 LOC7461723 LOC7488907 LOC25501006 LOC25501008 LOC123054920 LOC543217 LOC123428135 LOC123427448 LOC121210886 LOC107945622 LOC111213954 LOC106452154 CHLRE_02g107300v5 LOC8060419 LOC8058459 LOC102582563 LOC102581931 LOC102610554 LOC100827466 LOC100834273 LOC107786069 LOC107823498
Function* dihydrodipicolinate synthase 1 dihydrodipicolinate synthase 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic dihydrodipicolinate synthase 2 dihydrodipicolinate synthase 1 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic uncharacterized protein 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00300 Lysine biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 4
ath00261 Monobactam biosynthesis 3
ath00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath00300 Lysine biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma01210 2-Oxocarboxylic acid metabolism 3
gma03013 Nucleocytoplasmic transport 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03013 Nucleocytoplasmic transport 3
sly00261 Monobactam biosynthesis 2
sly00300 Lysine biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00300 Lysine biosynthesis 3
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00230 Purine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04626 Plant-pathogen interaction 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00261 Monobactam biosynthesis 3
bra00300 Lysine biosynthesis 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00670 One carbon pool by folate 3
tae00240 Pyrimidine metabolism 2
tae00790 Folate biosynthesis 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
tae04626 Plant-pathogen interaction 2
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu00300 Lysine biosynthesis 3
hvu00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00261 Monobactam biosynthesis 4
ghi00300 Lysine biosynthesis 4
ghi03010 Ribosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00261 Monobactam biosynthesis 4
ghi00300 Lysine biosynthesis 4
ghi03010 Ribosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00230 Purine metabolism 3
cre01232 Nucleotide metabolism 3
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot00261 Monobactam biosynthesis 2
sot00300 Lysine biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot01230 Biosynthesis of amino acids 3
sot00230 Purine metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
sot00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit00190 Oxidative phosphorylation 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi03420 Nucleotide excision repair 2
bdi03010 Ribosome 2
bdi00261 Monobactam biosynthesis 2
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
bdi00261 Monobactam biosynthesis 2
bdi00300 Lysine biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825259 819152 100788930 100806626 101250089 101250558 4335317 100282239 542379 103866894 103862855 100262665 7461723 7488907 25501006 25501008 123054920 543217 123428135 123427448 121210886 107945622 111213954 106452154 5725512 8060419 8058459 102582563 102581931 102610554 100827466 100834273 107786069 107823498
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