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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  100286242  uncharacterized LOC100286242 
 zma-u.5  100286041  uncharacterized LOC100286041 
 osa-u.5  4338883  cypmaclein 
 tae-r.2  123162504  gibberellin-regulated protein 2 
 ath-u.5  GASA3  GAST1 protein homolog 3 
 ath-u.5  GASA2  GAST1 protein homolog 2 
 gma-u.5  GASA37  gibberellin-regulated protein 37 
 gma-u.5  GASA4  gibberellin-regulated protein 4 
 gma-u.5  GASA24  gibberellin-regulated protein 24 
 sly-u.5  SN2  snakin-2 
 sly-u.5  101259800  cypmaclein 
 sly-u.5  101248656  cypmaclein-like 
 bra-r.6  103832021  gibberellin-regulated protein 1 
 bra-r.6  103852979  gibberellin-regulated protein 1 
 vvi-u.5  100266028  snakin-2 
 ppo-u.5  7493965  gibberellin-regulated protein 1 
 ppo-u.5  7493964  gibberellin-regulated protein 11 
 mtr-u.5  11406624  gibberellin-regulated protein 11 
 mtr-u.5  11412608  snakin-2 
 mtr-u.5  11428090  gibberellin-regulated protein 1 
 ghi-r.1  107905506  gibberellin-regulated protein 1 
 ghi-r.1  107938108  gibberellin-regulated protein 1 
 bna-r.1  125598049  gibberellin-regulated protein 1-like 
 bna-r.1  106374684  gibberellin-regulated protein 1 
 bna-r.1  106433346  gibberellin-regulated protein 1 
 sot-r.1  102582131  snakin-2-like 
 sot-r.1  102599648  gibberellin-regulated protein 11-like 
 sot-r.1  102589718  gibberellin-regulated protein 11-like 
 cit-r.1  102628717  gibberellin-regulated protein 1 
 cit-r.1  102628220  snakin-2 
 nta-r.1  107801590  snakin-2 
 nta-r.1  107771705  snakin-2 
 nta-r.1  107785374  snakin-2-like 

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Top 50 coexpressed genes to 100286242 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100286242 (zma-u.5 coexpression data)

CoexMap"8058507"


sbiLOC8058507 | Entrez gene ID : 8058507
Species zma osa tae ath gma sly bra vvi ppo mtr ghi bna sot cit nta bdi cre sbi hvu
Paralog 2 1 1 2 3 3 2 1 2 3 2 3 3 2 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002439852.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 9,  vacu 1  (predict for XP_002439852.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_002439852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
100286242


zma-u.5
for
100286041


osa-u.5
for
4338883


tae-r.2
for
123162504


ath-u.5
for
GASA3


ath-u.5
for
GASA2


gma-u.5
for
GASA37


gma-u.5
for
GASA4


gma-u.5
for
GASA24


sly-u.5
for
SN2


sly-u.5
for
101259800


sly-u.5
for
101248656


bra-r.6
for
103832021


bra-r.6
for
103852979


vvi-u.5
for
100266028


ppo-u.5
for
7493965


ppo-u.5
for
7493964


mtr-u.5
for
11406624


mtr-u.5
for
11412608


mtr-u.5
for
11428090


ghi-r.1
for
107905506


ghi-r.1
for
107938108


bna-r.1
for
125598049


bna-r.1
for
106374684


bna-r.1
for
106433346


sot-r.1
for
102582131


sot-r.1
for
102599648


sot-r.1
for
102589718


cit-r.1
for
102628717


cit-r.1
for
102628220


nta-r.1
for
107801590


nta-r.1
for
107771705


nta-r.1
for
107785374



Ortholog ID: 1255
Species zma zma osa tae ath ath ath gma gma sly sly sly bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC100286242 LOC100286041 LOC4338883 LOC123148837 GASA3 GASA2 GASA1 GASA37 GASA4 SN2 LOC101259800 LOC101248656 LOC103852979 LOC103830639 LOC100266028 LOC7493965 LOC7493964 LOC11406624 LOC11412608 LOC11428882 LOC107938108 LOC107938126 LOC107940708 LOC106374684 LOC106433346 LOC106425883 LOC102582131 LOC102589718 LOC102588973 LOC102628717 LOC102628220 LOC107815936 LOC107813154 LOC107803188
Function* uncharacterized LOC100286242 uncharacterized LOC100286041 cypmaclein cypmaclein GAST1 protein homolog 3 GAST1 protein homolog 2 GAST1 protein homolog 1 gibberellin-regulated protein 37 gibberellin-regulated protein 4 snakin-2 cypmaclein cypmaclein-like gibberellin-regulated protein 1 gibberellin-regulated protein 1 snakin-2 gibberellin-regulated protein 1 gibberellin-regulated protein 11 gibberellin-regulated protein 11 snakin-2 gibberellin-regulated protein 11 gibberellin-regulated protein 1 gibberellin-regulated protein 11 gibberellin-regulated protein 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1-like snakin-2-like gibberellin-regulated protein 11-like gibberellin-regulated protein 1-like gibberellin-regulated protein 1 snakin-2 gibberellin-regulated protein 11 gibberellin-regulated protein 1-like snakin-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00402 Benzoxazinoid biosynthesis 6
tae00999 Biosynthesis of various plant secondary metabolites 6
tae00901 Indole alkaloid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00330 Arginine and proline metabolism 2
cit00906 Carotenoid biosynthesis 2
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta00010 Glycolysis / Gluconeogenesis 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100286242 100286041 4338883 123148837 826545 826546 843908 102660133 100795140 101245301 101259800 101248656 103852979 103830639 100266028 7493965 7493964 11406624 11412608 11428882 107938108 107938126 107940708 106374684 106433346 106425883 102582131 102589718 102588973 102628717 102628220 107815936 107813154 107803188
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