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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059353   AP-4 complex subunit epsilon 
 zma-u.5   103636362   AP-4 complex subunit epsilon 
 zma-u.5   100383591   uncharacterized LOC100383591 
 osa-u.5   4324331   AP-4 complex subunit epsilon 
 ath-u.5   AT1G31730   Adaptin family protein 
 gma-u.5   100819573   AP-4 complex subunit epsilon 
 gma-u.5   100806914   AP-4 complex subunit epsilon 
 gma-u.5   100780202   AP-4 complex subunit epsilon 
 sly-u.5   101246170   AP-4 complex subunit epsilon 
 vvi-u.5   100249377   AP-4 complex subunit epsilon 
 ppo-u.5   18098423   AP-4 complex subunit epsilon 
 mtr-u.5   11444821   AP-4 complex subunit epsilon 

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Top 50 coexpressed genes to 8059353 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059353 (sbi-r.1 coexpression data)

CoexMap"8059353"


sbiLOC8059353 | Entrez gene ID : 8059353      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04142 [list] [network] Lysosome (69 genes)
GO BP
GO:0006898 [list] [network] receptor-mediated endocytosis  (33 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (256 genes)  IEA  
GO CC
GO:0030124 [list] [network] AP-4 adaptor complex  (1 genes)  IEA  
GO:0030117 [list] [network] membrane coat  (69 genes)  IEA  
GO MF
GO:0140312 [list] [network] cargo adaptor activity  (8 genes)  IEA  
Protein XP_002458982.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  E.R. 2,  cysk_nucl 1,  E.R._plas 1  (predict for XP_002458982.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002458982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059353

.
zma-u.5
for
103636362

.
zma-u.5
for
100383591

.
osa-u.5
for
4324331

.
ath-u.5
for
AT1G31730

.
gma-u.5
for
100819573

.
gma-u.5
for
100806914

.
gma-u.5
for
100780202

.
sly-u.5
for
101246170

.
vvi-u.5
for
100249377

.
ppo-u.5
for
18098423

.
mtr-u.5
for
11444821

.


Ortholog ID: 7058
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G31730 LOC100806914 LOC100779276 LOC101246170 LOC4324331 LOC100383591 LOC103636362 LOC103840585 LOC103840230 LOC100249377 LOC18098423 LOC11444821 LOC123063057 LOC123080259 LOC123445199 LOC107900692 LOC107933487 LOC125577603 LOC106347151 CHLRE_06g310000v5 LOC8059353 LOC102584455 LOC102624704 LOC100839284 LOC107782050 LOC107776976
Function* Adaptin family protein AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon uncharacterized LOC100383591 AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon-like AP-4 complex subunit epsilon uncharacterized protein AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon AP-4 complex subunit epsilon-like AP-4 complex subunit epsilon
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04142 Lysosome 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04142 Lysosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04142 Lysosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 7
bra04142 Lysosome 5
bra05100 Bacterial invasion of epithelial cells 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 4
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot04144 Endocytosis 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 6
nta03015 mRNA surveillance pathway 6
nta03013 Nucleocytoplasmic transport 4
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840060 100806914 100779276 101246170 4324331 100383591 103636362 103840585 103840230 100249377 18098423 11444821 123063057 123080259 123445199 107900692 107933487 125577603 106347151 5716809 8059353 102584455 102624704 100839284 107782050 107776976
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