ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8059355	selenium-binding protein 1
zma-u.5	100192654	uncharacterized LOC100192654
osa-u.5	4324333	selenium-binding protein 1
tae-r.2	123071957	selenium-binding protein 1
tae-r.2	123080262	selenium-binding protein 1
tae-r.2	123063062	selenium-binding protein 1
hvu-r.1	123445202	selenium-binding protein 1-like
bdi-r.1	100840507	selenium-binding protein 1
ath-u.5	SBP3	selenium-binding protein 3
ath-u.5	SBP1	selenium-binding protein 1
ath-u.5	SBP2	selenium-binding protein 2
gma-u.5	606297	selenium-binding protein 1
gma-u.5	100813286	selenium-binding protein 2
gma-u.5	100794235	selenium-binding protein 1
sly-u.5	101249583	selenium-binding protein 2
bra-r.6	103833776	selenium-binding protein 1
bra-r.6	103828707	selenium-binding protein 3
bra-r.6	103863568	selenium-binding protein 2
vvi-u.5	100265737	selenium-binding protein 1
ppo-u.5	18107105	selenium-binding protein 1
ppo-u.5	7495831	selenium-binding protein 1
mtr-u.5	11436310	selenium-binding protein 1
ghi-r.1	107934466	selenium-binding protein 2
ghi-r.1	107934467	selenium-binding protein 1
ghi-r.1	107934468	selenium-binding protein 1
bna-r.1	106449425	selenium-binding protein 1-like
bna-r.1	111202961	selenium-binding protein 3
bna-r.1	106401617	selenium-binding protein 2
sot-r.1	102600424	selenium-binding protein 2-like
cit-r.1	102613825	selenium-binding protein 2
nta-r.1	107791028	selenium-binding protein 1-like
nta-r.1	107765905	selenium-binding protein 1
cre-r.1	CHLRE_03g166050v5	uncharacterized protein

Top 50 coexpressed genes to 8059355 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8059355 (sbi-r.1 coexpression data)

CoexMap"8059355"

[Cytoscape]

Annotation

functional annotation

KEGG

sbi00920 [list] [network] Sulfur metabolism (32 genes)

GO BP

GO CC

GO MF

GO:0008430 [list] [network] selenium binding

(1 genes)

IEA

Protein

XP_002456833.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 4, mito 1, E.R._vacu 1

(predict for XP_002456833.1)

Subcellular
localization
TargetP

other 6

(predict for XP_002456833.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8059355	zma-u.5 for 100192654	osa-u.5 for 4324333	tae-r.2 for 123071957	tae-r.2 for 123080262	tae-r.2 for 123063062	hvu-r.1 for 123445202	bdi-r.1 for 100840507	ath-u.5 for SBP3	ath-u.5 for SBP1	ath-u.5 for SBP2	gma-u.5 for 606297	gma-u.5 for 100813286	gma-u.5 for 100794235	sly-u.5 for 101249583	bra-r.6 for 103833776	bra-r.6 for 103828707	bra-r.6 for 103863568	vvi-u.5 for 100265737	ppo-u.5 for 18107105	ppo-u.5 for 7495831	mtr-u.5 for 11436310	ghi-r.1 for 107934466	ghi-r.1 for 107934467	ghi-r.1 for 107934468	bna-r.1 for 106449425	bna-r.1 for 111202961	bna-r.1 for 106401617	sot-r.1 for 102600424	cit-r.1 for 102613825	nta-r.1 for 107791028	nta-r.1 for 107765905	cre-r.1 for CHLRE_03g166050v5

Ortholog

Ortholog ID: 3934

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SBP3

SBP1

SBP2

Function^*

selenium-binding protein 1

uncharacterized LOC100192654

selenium-binding protein 1

selenium-binding protein 1-like

selenium-binding protein 1

selenium-binding protein 3

selenium-binding protein 1

selenium-binding protein 2

selenium-binding protein 1

selenium-binding protein 2

selenium-binding protein 1

selenium-binding protein 2

selenium-binding protein 1-like

selenium-binding protein 1

selenium-binding protein 2

selenium-binding protein 1

selenium-binding protein 1-like

selenium-binding protein 2-like

selenium-binding protein 2

selenium-binding protein 1-like

selenium-binding protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00260	Glycine, serine and threonine metabolism	2
sbi01230	Biosynthesis of amino acids	2
sbi00450	Selenocompound metabolism	2
sbi00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	5
zma00920	Sulfur metabolism	4
zma01230	Biosynthesis of amino acids	2
zma00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00280	Valine, leucine and isoleucine degradation	5
osa00260	Glycine, serine and threonine metabolism	3
osa00310	Lysine degradation	3
osa01230	Biosynthesis of amino acids	2
osa00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	8
tae00330	Arginine and proline metabolism	4
tae00010	Glycolysis / Gluconeogenesis	3
tae00053	Ascorbate and aldarate metabolism	3
tae00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	8
tae00330	Arginine and proline metabolism	4
tae00010	Glycolysis / Gluconeogenesis	3
tae00053	Ascorbate and aldarate metabolism	3
tae00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	8
tae00330	Arginine and proline metabolism	4
tae00010	Glycolysis / Gluconeogenesis	3
tae00053	Ascorbate and aldarate metabolism	3
tae00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00350	Tyrosine metabolism	3
hvu00640	Propanoate metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00270	Cysteine and methionine metabolism	4
bdi00450	Selenocompound metabolism	3
bdi01230	Biosynthesis of amino acids	3
bdi00920	Sulfur metabolism	2
bdi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00920	Sulfur metabolism	5
ath01320	Sulfur cycle	3
ath00270	Cysteine and methionine metabolism	2
ath01200	Carbon metabolism	2
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01210	2-Oxocarboxylic acid metabolism	9
ath00966	Glucosinolate biosynthesis	8
ath00290	Valine, leucine and isoleucine biosynthesis	3
ath00270	Cysteine and methionine metabolism	3
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00920	Sulfur metabolism	5
gma00270	Cysteine and methionine metabolism	4
gma01320	Sulfur cycle	3
gma00670	One carbon pool by folate	3
gma04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00920	Sulfur metabolism	3
gma00270	Cysteine and methionine metabolism	3
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00280	Valine, leucine and isoleucine degradation	3
sly00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00410	beta-Alanine metabolism	4
bra01200	Carbon metabolism	4
bra00071	Fatty acid degradation	2
bra00592	alpha-Linolenic acid metabolism	2
bra00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00920	Sulfur metabolism	2
bra04144	Endocytosis	2
bra04145	Phagosome	2
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2
ppo00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	4
ppo01320	Sulfur cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00920	Sulfur metabolism	3
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi01200	Carbon metabolism	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00920	Sulfur metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00920	Sulfur metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	7
sot00020	Citrate cycle (TCA cycle)	2
sot01200	Carbon metabolism	2
sot01210	2-Oxocarboxylic acid metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit04517	IgSF CAM signaling	2
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	5
nta00920	Sulfur metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00051	Fructose and mannose metabolism	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	4
nta04712	Circadian rhythm - plant	4
nta04141	Protein processing in endoplasmic reticulum	2
nta00920	Sulfur metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00270	Cysteine and methionine metabolism	3
cre00920	Sulfur metabolism	3
cre01200	Carbon metabolism	2
cre01230	Biosynthesis of amino acids	2
cre01320	Sulfur cycle	2

Expression

Expression pattern

Entrez Gene ID^*

8059355

100192654

4324333

123071957

123080262

123063062

123445202

100840507

821962

827039

827040

606297

100794235

100788278

101249583

103833776

103863568

103863571

100265737

18107105

7495831

11436310

107934466

107934467

107934468

106449425

106394635

106415119

102600424

102613825

107791028

107765905

5729027

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Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	1	1	3	1	1	3	3	1	3	1	2	1	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8059355 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8059355 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**