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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059385   ubiquitin-conjugating enzyme E2 27 
 zma-u.5   100283953   ubiquitin-conjugating enzyme E2-22 kDa 
 osa-u.5   4327237   ubiquitin-conjugating enzyme E2 27 
 ath-u.5   UBC27   ubiquitin-conjugating enzyme 27 
 gma-u.5   100808816   ubiquitin-conjugating enzyme E2 27-like 
 gma-u.5   100527458   putative ubiquitin-conjugating enzyme E2 
 sly-u.5   UBC27   ubiquitin conjugating enzyme 
 vvi-u.5   100259387   ubiquitin-conjugating enzyme E2 27 
 ppo-u.5   7484871   ubiquitin-conjugating enzyme E2 27 
 ppo-u.5   7454751   ubiquitin-conjugating enzyme E2 27 
 mtr-u.5   11424383   ubiquitin-conjugating enzyme E2 27 

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Top 50 coexpressed genes to 8059385 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059385 (sbi-r.1 coexpression data)

CoexMap"8059385"


sbiLOC8059385 | Entrez gene ID : 8059385      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04120 [list] [network] Ubiquitin mediated proteolysis (153 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (65 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (133 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (19 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002459014.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_002459014.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002459014.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059385

.
zma-u.5
for
100283953

.
osa-u.5
for
4327237

.
ath-u.5
for
UBC27

.
gma-u.5
for
100808816

.
gma-u.5
for
100527458

.
sly-u.5
for
UBC27

.
vvi-u.5
for
100259387

.
ppo-u.5
for
7484871

.
ppo-u.5
for
7454751

.
mtr-u.5
for
11424383

.


Ortholog ID: 9728
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UBC27 LOC100527458 LOC100808816 UBC27 LOC4327237 LOC100283953 LOC103857263 LOC100259387 LOC7454751 LOC7484871 LOC11424383 LOC123072079 LOC123063178 LOC123445295 LOC121224279 LOC107946874 LOC106387523 LOC106387904 CHLRE_01g046850v5 LOC8059385 LOC102588892 LOC102611698 LOC100831524 LOC107815862 LOC107803861
Function* ubiquitin-conjugating enzyme 27 putative ubiquitin-conjugating enzyme E2 ubiquitin-conjugating enzyme E2 27-like ubiquitin conjugating enzyme ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2-22 kDa ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 uncharacterized protein ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27-like ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27 ubiquitin-conjugating enzyme E2 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma03050 Proteasome 2
gma04120 Ubiquitin mediated proteolysis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 8
gma00190 Oxidative phosphorylation 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03050 Proteasome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
zma04144 Endocytosis 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo01230 Biosynthesis of amino acids 5
ppo00190 Oxidative phosphorylation 3
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00620 Pyruvate metabolism 2
ppo03010 Ribosome 2
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae04120 Ubiquitin mediated proteolysis 5
tae00190 Oxidative phosphorylation 2
tae03083 Polycomb repressive complex 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi04120 Ubiquitin mediated proteolysis 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna04142 Lysosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04146 Peroxisome 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit00513 Various types of N-glycan biosynthesis 3
cit00190 Oxidative phosphorylation 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 3
bdi04144 Endocytosis 2
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04120 Ubiquitin mediated proteolysis 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835159 100527458 100808816 544292 4327237 100283953 103857263 100259387 7454751 7484871 11424383 123072079 123063178 123445295 121224279 107946874 106387523 106387904 5715675 8059385 102588892 102611698 100831524 107815862 107803861
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