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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059688   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 zma-u.5   100279772   uncharacterized LOC100279772 
 osa-u.5   4329995   polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 
 ath-u.5   AT5G14580   polyribonucleotide nucleotidyltransferase 
 gma-u.5   100816982   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 gma-u.5   102669209   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 sly-u.5   101256146   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 vvi-u.5   100257571   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 ppo-u.5   7487862   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 mtr-u.5   11434901   polyribonucleotide nucleotidyltransferase 2, mitochondrial 

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Top 50 coexpressed genes to 8059688 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059688 (sbi-r.1 coexpression data)

CoexMap"8059688"


sbiLOC8059688 | Entrez gene ID : 8059688      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03018 [list] [network] RNA degradation (112 genes)
GO BP
GO:0000958 [list] [network] mitochondrial mRNA catabolic process  (2 genes)  IEA  
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (5 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (94 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0004654 [list] [network] polyribonucleotide nucleotidyltransferase activity  (2 genes)  IEA  
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (39 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002454178.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 5,  mito 4,  cyto_mito 2  (predict for XP_002454178.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002454178.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059688

.
zma-u.5
for
100279772

.
osa-u.5
for
4329995

.
ath-u.5
for
AT5G14580

.
gma-u.5
for
100816982

.
gma-u.5
for
102669209

.
sly-u.5
for
101256146

.
vvi-u.5
for
100257571

.
ppo-u.5
for
7487862

.
mtr-u.5
for
11434901

.


Ortholog ID: 8597
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G14580 LOC100816982 LOC102669209 LOC101256146 LOC4329995 LOC100279772 LOC103846477 LOC103856086 LOC100257571 LOC7487862 LOC11434901 LOC123144840 LOC123137482 LOC123405999 LOC107888666 LOC107892267 LOC106372102 LOC106416529 LOC8059688 LOC102598659 LOC102628795 LOC100830539 LOC107801697 LOC107816939
Function* polyribonucleotide nucleotidyltransferase polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like uncharacterized LOC100279772 polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like polyribonucleotide nucleotidyltransferase 2, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03020 RNA polymerase 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831309 100816982 102669209 101256146 4329995 100279772 103846477 103856086 100257571 7487862 11434901 123144840 123137482 123405999 107888666 107892267 106372102 106416529 8059688 102598659 102628795 100830539 107801697 107816939
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