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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060602   uncharacterized LOC8060602 
 zma-u.5   100282041   cation cation antiporter 
 zma-u.5   100285634   cation cation antiporter 
 osa-u.5   9271609   uncharacterized LOC9271609 
 osa-u.5   4329112   uncharacterized LOC4329112 
 osa-u.5   4346146   uncharacterized LOC4346146 
 ath-u.5   AT3G55600   Membrane fusion protein Use1 
 ath-u.5   AT1G54110   Membrane fusion protein Use1 
 gma-u.5   100812755   uncharacterized LOC100812755 
 gma-u.5   100811568   uncharacterized LOC100811568 
 gma-u.5   100793814   putative membrane fusion protein Use1 
 sly-u.5   101252142   uncharacterized LOC101252142 
 sly-u.5   101246592   uncharacterized LOC101246592 
 vvi-u.5   100260177   uncharacterized LOC100260177 
 vvi-u.5   100246170   uncharacterized LOC100246170 
 ppo-u.5   7490468   uncharacterized LOC7490468 
 mtr-u.5   11418616   uncharacterized LOC11418616 
 mtr-u.5   25500698   uncharacterized LOC25500698 

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Top 50 coexpressed genes to 8060602 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060602 (sbi-r.1 coexpression data)

CoexMap"8060602"


sbiLOC8060602 | Entrez gene ID : 8060602      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 3 2 3 2 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04130 [list] [network] SNARE interactions in vesicular transport (41 genes)
GO BP
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (34 genes)  IEA  
GO CC
GO:0031201 [list] [network] SNARE complex  (41 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (492 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (37 genes)  IEA  
Protein XP_002445805.1 [sequence] [blastp]
XP_021320552.1 [sequence] [blastp]
XP_021320553.1 [sequence] [blastp]
Subcellular
localization
wolf
golg 4,  chlo 3,  plas 1,  E.R._plas 1,  nucl 1,  mito 1  (predict for XP_002445805.1)
golg 4,  chlo 3,  plas 1,  E.R._plas 1,  nucl 1,  mito 1  (predict for XP_021320552.1)
golg 4,  chlo 3,  plas 1,  E.R._plas 1,  nucl 1,  mito 1  (predict for XP_021320553.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_002445805.1)
mito 5  (predict for XP_021320552.1)
mito 5  (predict for XP_021320553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060602

.
zma-u.5
for
100282041

.
zma-u.5
for
100285634

.
osa-u.5
for
9271609

.
osa-u.5
for
4329112

.
osa-u.5
for
4346146

.
ath-u.5
for
AT3G55600

.
ath-u.5
for
AT1G54110

.
gma-u.5
for
100812755

.
gma-u.5
for
100811568

.
gma-u.5
for
100793814

.
sly-u.5
for
101252142

.
sly-u.5
for
101246592

.
vvi-u.5
for
100260177

.
vvi-u.5
for
100246170

.
ppo-u.5
for
7490468

.
mtr-u.5
for
11418616

.
mtr-u.5
for
25500698

.


Ortholog ID: 4753
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo mtr mtr tae hvu ghi ghi bna sbi sot sot cit bdi nta nta
Symbol AT1G54110 AT3G55600 LOC100811568 LOC100812755 LOC101252142 LOC101246592 LOC4346146 LOC9271609 LOC100282041 LOC100285634 LOC103841471 LOC100260177 LOC100246170 LOC7490468 LOC25500698 LOC11418616 LOC123168125 LOC123409658 LOC107915406 LOC107914922 BNAA09G35220D LOC8060602 LOC102583810 LOC102587298 LOC102608784 LOC100821950 LOC107770677 LOC107786363
Function* Membrane fusion protein Use1 Membrane fusion protein Use1 uncharacterized LOC100811568 uncharacterized LOC100812755 uncharacterized LOC101252142 uncharacterized LOC101246592 uncharacterized LOC4346146 uncharacterized LOC9271609 cation cation antiporter cation cation antiporter uncharacterized LOC103841471 uncharacterized LOC100260177 uncharacterized LOC100246170 uncharacterized LOC7490468 uncharacterized LOC25500698 uncharacterized LOC11418616 uncharacterized LOC123168125 uncharacterized LOC123409658 uncharacterized LOC107915406 uncharacterized LOC107914922 uncharacterized BNAA09G35220D uncharacterized LOC8060602 uncharacterized LOC102583810 uncharacterized LOC102587298 uncharacterized LOC102608784 uncharacterized LOC100821950 uncharacterized LOC107770677 uncharacterized LOC107786363
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 4
ath03022 Basal transcription factors 2
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma00790 Folate biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04130 SNARE interactions in vesicular transport 2
bra00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi04130 SNARE interactions in vesicular transport 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi04130 SNARE interactions in vesicular transport 4
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta04144 Endocytosis 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta04130 SNARE interactions in vesicular transport 3
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841850 824725 100811568 100812755 101252142 101246592 4346146 9271609 100282041 100285634 103841471 100260177 100246170 7490468 25500698 11418616 123168125 123409658 107915406 107914922 106412215 8060602 102583810 102587298 102608784 100821950 107770677 107786363
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