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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062225   DNA repair protein recA homolog 1, chloroplastic 
 zma-u.5   100282426   protein recA 
 osa-u.5   4333537   DNA repair protein recA homolog 1, chloroplastic 
 ath-u.5   RECA1   recA DNA recombination family protein 
 gma-u.5   100788534   DNA repair protein recA homolog 1, chloroplastic 
 sly-u.5   101261637   DNA repair protein recA homolog 1, chloroplastic 
 vvi-u.5   100249133   DNA repair protein recA homolog 1, chloroplastic 
 ppo-u.5   18095763   DNA repair protein recA homolog 1, chloroplastic 
 mtr-u.5   25502471   DNA repair protein recA homolog 1, chloroplastic 

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Top 50 coexpressed genes to 8062225 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062225 (sbi-r.1 coexpression data)

CoexMap"8062225"


sbiLOC8062225 | Entrez gene ID : 8062225    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03440 [list] [network] Homologous recombination (62 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (318 genes)  IEA  
GO CC
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (68 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (434 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002466766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_002466766.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_002466766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062225

.
zma-u.5
for
100282426

.
osa-u.5
for
4333537

.
ath-u.5
for
RECA1

.
gma-u.5
for
100788534

.
sly-u.5
for
101261637

.
vvi-u.5
for
100249133

.
ppo-u.5
for
18095763

.
mtr-u.5
for
25502471

.


Ortholog ID: 8316
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RECA1 LOC100788534 LOC101261637 LOC4333537 LOC100282426 LOC103853162 LOC103830499 LOC100249133 LOC18095763 LOC25502471 LOC123113227 LOC123122736 LOC123452124 LOC121203737 LOC121213739 LOC106353418 LOC106381457 CHLRE_07g314650v5 LOC8062225 LOC102585921 LOC102626696 LOC100841100 LOC107816977 LOC107810192
Function* recA DNA recombination family protein DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic protein recA DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic-like DNA repair protein recA homolog 1, chloroplastic-like uncharacterized protein DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic DNA repair protein recA homolog 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 9
osa00300 Lysine biosynthesis 5
osa00261 Monobactam biosynthesis 2
osa00470 D-Amino acid metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03440 Homologous recombination 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00061 Fatty acid biosynthesis 2
sbi00780 Biotin metabolism 2
sbi01212 Fatty acid metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844246 100788534 101261637 4333537 100282426 103853162 103830499 100249133 18095763 25502471 123113227 123122736 123452124 121203737 121213739 106353418 106381457 5726340 8062225 102585921 102626696 100841100 107816977 107810192
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