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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064236   E3 ubiquitin-protein ligase PUB23 
 zma-u.5   100274458   ubiquitin-protein ligase 
 zma-u.5   103627250   E3 ubiquitin-protein ligase PUB23 
 ath-u.5   PUB23   plant U-box 23 
 ath-u.5   PUB24   E3 ubiquitin-protein ligase PUB24-like protein 
 ath-u.5   PUB22   plant U-box 22 
 gma-u.5   100786877   E3 ubiquitin-protein ligase PUB23 
 gma-u.5   100785598   E3 ubiquitin-protein ligase PUB23 
 sly-u.5   101247100   E3 ubiquitin-protein ligase PUB23 
 vvi-u.5   100250551   E3 ubiquitin-protein ligase PUB23 
 vvi-u.5   100254792   E3 ubiquitin-protein ligase PUB23 
 vvi-u.5   100261566   E3 ubiquitin-protein ligase PUB24 
 ppo-u.5   18100610   E3 ubiquitin-protein ligase PUB22 
 mtr-u.5   25483686   E3 ubiquitin-protein ligase PUB23 
 mtr-u.5   11419064   E3 ubiquitin-protein ligase PUB23 
 mtr-u.5   25499491   E3 ubiquitin-protein ligase PUB22 

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Top 50 coexpressed genes to 8064236 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064236 (sbi-r.1 coexpression data)

CoexMap"8064236"


sbiLOC8064236 | Entrez gene ID : 8064236      
Species sbi zma ath gma sly vvi ppo mtr bra nta osa cre cit hvu bdi sot tae bna ghi
Paralog 1 2 3 2 1 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (192 genes)  IEA  
Protein XP_002453951.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  E.R. 3,  cyto_E.R. 3,  plas 2  (predict for XP_002453951.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_002453951.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064236

.
zma-u.5
for
100274458

.
zma-u.5
for
103627250

.
ath-u.5
for
PUB23

.
ath-u.5
for
PUB24

.
ath-u.5
for
PUB22

.
gma-u.5
for
100786877

.
gma-u.5
for
100785598

.
sly-u.5
for
101247100

.
vvi-u.5
for
100250551

.
vvi-u.5
for
100254792

.
vvi-u.5
for
100261566

.
ppo-u.5
for
18100610

.
mtr-u.5
for
25483686

.
mtr-u.5
for
11419064

.
mtr-u.5
for
25499491

.


Ortholog ID: 456
Species ath ath gma gma osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi bna bna sbi sot sot cit bdi nta
Symbol PUB22 PUB24 LOC100778012 LOC100811293 LOC4337468 LOC100274458 LOC103627250 LOC103860764 LOC103845959 LOC100266002 LOC7488089 LOC25499491 LOC123134976 LOC123134991 LOC123403862 LOC123403891 LOC107925519 LOC106452503 LOC106415132 LOC8064235 LOC102604295 LOC102603282 LOC102631041 LOC100825125 LOC107764225
Function* plant U-box 22 E3 ubiquitin-protein ligase PUB24-like protein E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB24 E3 ubiquitin-protein ligase PUB23 ubiquitin-protein ligase E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB24 E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB22-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB23-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 3
hvu00430 Taurine and hypotaurine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824410 820357 100778012 100811293 4337468 100274458 103627250 103860764 103845959 100266002 7488089 25499491 123134976 123134991 123403862 123403891 107925519 106452503 106415132 8064235 102604295 102603282 102631041 100825125 107764225
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