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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065451   ethylene-responsive transcription factor 1 
 zma-u.5   103639077   putative AP2/EREBP transcription factor superfamily protein 
 zma-u.5   100284306   Ethylene response factor 
 osa-u.5   4347142   ethylene-responsive transcription factor 1-like 
 osa-u.5   4340383   ethylene-responsive transcription factor 1-like 
 osa-u.5   4330935   ethylene-responsive transcription factor 1-like 
 ath-u.5   RAP2.2   uncharacterized protein 
 ath-u.5   RAP2.12   uncharacterized protein 
 gma-u.5   ERF7   ethylene-responsive transcription factor 7 
 gma-u.5   EREB   ethylene responsive protein 
 gma-u.5   ERF3   EREBP/AP2 transcription factor 
 sly-u.5   JERF3   GCC box binding protein C.4 
 sly-u.5   JERF1   transcription factor JERF1 
 sly-u.5   ERF-E5   ethylene response factor E.5 
 vvi-u.5   100248027   ethylene-responsive transcription factor RAP2-12 
 ppo-u.5   18094682   ethylene-responsive transcription factor RAP2-12 
 ppo-u.5   7483575   ethylene-responsive transcription factor RAP2-12 
 mtr-u.5   25488000   ethylene-responsive transcription factor RAP2-2 
 mtr-u.5   11444630   ethylene-responsive transcription factor RAP2-2 

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Top 50 coexpressed genes to 8065451 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065451 (sbi-r.1 coexpression data)

CoexMap"8065451"


sbiLOC8065451 | Entrez gene ID : 8065451      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 3 2 3 3 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (49 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1111 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
Protein XP_002436631.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 2,  chlo_mito 2  (predict for XP_002436631.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002436631.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065451

.
zma-u.5
for
103639077

.
zma-u.5
for
100284306

.
osa-u.5
for
4347142

.
osa-u.5
for
4340383

.
osa-u.5
for
4330935

.
ath-u.5
for
RAP2.2

.
ath-u.5
for
RAP2.12

.
gma-u.5
for
ERF7

.
gma-u.5
for
EREB

.
gma-u.5
for
ERF3

.
sly-u.5
for
JERF3

.
sly-u.5
for
JERF1

.
sly-u.5
for
ERF-E5

.
vvi-u.5
for
100248027

.
ppo-u.5
for
18094682

.
ppo-u.5
for
7483575

.
mtr-u.5
for
25488000

.
mtr-u.5
for
11444630

.


Ortholog ID: 1080
Species ath ath gma gma sly sly osa osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol RAP2.12 RAP2.2 EREB LOC100810376 ERF-E5 JERF3 LOC4347142 LOC4340383 LOC103639077 LOC103832647 LOC103870045 LOC100248027 LOC18094682 LOC7483575 LOC25488000 LOC11444630 LOC123141122 LOC123133734 LOC123397648 LOC107958349 LOC107897456 LOC106393623 LOC106439506 LOC8082696 LOC110432817 LOC102586220 LOC102591860 LOC102624066 LOC100840803 LOC100823681 LOC107764761 LOC107763228
Function* uncharacterized protein uncharacterized protein ethylene responsive protein ethylene-responsive transcription factor RAP2-2 ethylene response factor E.5 GCC box binding protein C.4 ethylene-responsive transcription factor 1-like ethylene-responsive transcription factor 1-like putative AP2/EREBP transcription factor superfamily protein ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-2 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-2 ethylene-responsive transcription factor RAP2-2 ethylene-responsive transcription factor 1-like ethylene-responsive transcription factor 1 ethylene-responsive transcription factor 1-like ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-2 ethylene-responsive transcription factor RAP2-2-like ethylene-responsive transcription factor 1 ethylene-responsive transcription factor 1-like ethylene-responsive transcription factor RAP2-12-like ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor 1 ethylene-responsive transcription factor 1 ethylene-responsive transcription factor RAP2-12 ethylene-responsive transcription factor RAP2-2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 6
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 7
sly04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 5
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 7
bra04517 IgSF CAM signaling 7
bra04814 Motor proteins 7
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 7
ppo04075 Plant hormone signal transduction 7
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00100 Steroid biosynthesis 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 5
sbi01250 Biosynthesis of nucleotide sugars 5
sbi00040 Pentose and glucuronate interconversions 2
sbi00053 Ascorbate and aldarate metabolism 2
sbi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04120 Ubiquitin mediated proteolysis 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 10
sot04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841829 820643 547957 100810376 101261693 543910 4347142 4340383 103639077 103832647 103870045 100248027 18094682 7483575 25488000 11444630 123141122 123133734 123397648 107958349 107897456 106393623 106439506 8082696 110432817 102586220 102591860 102624066 100840803 100823681 107764761 107763228
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