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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   107275233   uncharacterized LOC107275233 
 osa-u.5   4340610   putative DNA glycosylase At3g47830 
 gma-u.5   100802952   putative DNA glycosylase At3g47830 
 sly-u.5   101257755   putative DNA glycosylase At3g47830 
 vvi-u.5   100257083   putative DNA glycosylase At3g47830 
 ppo-u.5   7474873   putative DNA glycosylase At3g47830 
 mtr-u.5   11405585   putative DNA glycosylase At3g47830 

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Top 50 coexpressed genes to 107275233 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107275233 (zma-u.5 coexpression data)

CoexMap"8065700"


sbiLOC8065700 | Entrez gene ID : 8065700      
Species zma osa gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03410 [list] [network] Base excision repair (51 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (28 genes)  IEA  
GO CC
GO MF
GO:0003824 [list] [network] catalytic activity  (8648 genes)  IEA  
Protein XP_002438135.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_002438135.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002438135.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
107275233

.
osa-u.5
for
4340610

.
gma-u.5
for
100802952

.
sly-u.5
for
101257755

.
vvi-u.5
for
100257083

.
ppo-u.5
for
7474873

.
mtr-u.5
for
11405585

.


Ortholog ID: 10812
Species gma sly osa zma vvi ppo mtr tae hvu ghi ghi bna bna sot cit bdi nta nta
Symbol LOC100802952 LOC101257755 LOC4340610 LOC107275233 LOC100257083 LOC7474873 LOC11405585 LOC123152417 LOC123411211 LOC121224464 LOC107941538 LOC106413872 LOC111215525 LOC102582844 LOC102627550 LOC100825895 LOC107783606 LOC107760355
Function* putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 uncharacterized LOC107275233 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830 putative DNA glycosylase At3g47830
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04016 MAPK signaling pathway - plant 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 6
tae04517 IgSF CAM signaling 6
tae04814 Motor proteins 6
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03410 Base excision repair 2
nta00240 Pyrimidine metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100802952 101257755 4340610 107275233 100257083 7474873 11405585 123152417 123411211 121224464 107941538 106413872 111215525 102582844 102627550 100825895 107783606 107760355
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