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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066241   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 zma-u.5   101027256   uncharacterized LOC101027256 
 osa-u.5   4338388   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 ath-u.5   DG1   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   102668682   pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like 
 gma-u.5   100801996   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 sly-u.5   112940952   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 vvi-u.5   104878586   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 ppo-u.5   7465564   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 
 mtr-u.5   11426176   pentatricopeptide repeat-containing protein At5g67570, chloroplastic 

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Top 50 coexpressed genes to 8066241 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066241 (sbi-r.1 coexpression data)

CoexMap"8066241"


sbiLOC8066241 | Entrez gene ID : 8066241      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (71 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002467648.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_002467648.2)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_002467648.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066241

.
zma-u.5
for
101027256

.
osa-u.5
for
4338388

.
ath-u.5
for
DG1

.
gma-u.5
for
102668682

.
gma-u.5
for
100801996

.
sly-u.5
for
112940952

.
vvi-u.5
for
104878586

.
ppo-u.5
for
7465564

.
mtr-u.5
for
11426176

.


Ortholog ID: 10425
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol DG1 LOC102668682 LOC100801996 LOC112940952 LOC4338388 LOC101027256 LOC103874039 LOC104878586 LOC7465564 LOC11426176 LOC123077638 LOC123060552 LOC123413288 LOC123443059 LOC107913293 LOC107899277 LOC106348162 LOC106443943 LOC8066241 LOC102592656 LOC102624719 LOC100830288 LOC107775058 LOC107784842
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic uncharacterized LOC101027256 pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic pentatricopeptide repeat-containing protein At5g67570, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr00564 Glycerophospholipid metabolism 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836893 102668682 100801996 112940952 4338388 101027256 103874039 104878586 7465564 11426176 123077638 123060552 123413288 123443059 107913293 107899277 106348162 106443943 8066241 102592656 102624719 100830288 107775058 107784842
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