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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066561   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 zma-u.5   100274001   ATP-dependent Clp protease proteolytic subunit 
 osa-u.5   4339792   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 ath-u.5   CLPR1   CLP protease proteolytic subunit 1 
 gma-u.5   100820008   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 gma-u.5   100806258   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 sly-u.5   101256043   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 vvi-u.5   100253136   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 vvi-u.5   104877722   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like 
 ppo-u.5   7469631   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 mtr-u.5   11419358   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 

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Top 50 coexpressed genes to 8066561 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066561 (sbi-r.1 coexpression data)

CoexMap"8066561"


sbiLOC8066561 | Entrez gene ID : 8066561      
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (16 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (10 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (13 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (26 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (118 genes)  IEA  
Protein XP_002441620.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002441620.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_002441620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066561

.
zma-u.5
for
100274001

.
osa-u.5
for
4339792

.
ath-u.5
for
CLPR1

.
gma-u.5
for
100820008

.
gma-u.5
for
100806258

.
sly-u.5
for
101256043

.
vvi-u.5
for
100253136

.
vvi-u.5
for
104877722

.
ppo-u.5
for
7469631

.
mtr-u.5
for
11419358

.


Ortholog ID: 8736
Species ath gma gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CLPR1 LOC100820008 LOC100806258 LOC101256043 LOC4339792 LOC100274001 LOC103832904 LOC104877722 LOC100253136 LOC7469631 LOC11419358 LOC123183368 LOC123070664 LOC123452597 LOC107898796 LOC107945152 LOC106385720 LOC106439053 CHLRE_14g619100v5 LOC8066561 LOC102583426 LOC102608550 LOC100841936 LOC107766615 LOC107771248
Function* CLP protease proteolytic subunit 1 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic uncharacterized protein ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 2
nta00195 Photosynthesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841420 100820008 100806258 101256043 4339792 100274001 103832904 104877722 100253136 7469631 11419358 123183368 123070664 123452597 107898796 107945152 106385720 106439053 66056224 8066561 102583426 102608550 100841936 107766615 107771248
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