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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066720   SEC12-like protein 2 
 zma-u.5   100382688   uncharacterized LOC100382688 
 osa-u.5   4350905   SEC12-like protein 2 
 osa-u.5   9270427   SEC12-like protein 1 
 osa-u.5   4342601   SEC12-like protein 1 
 ath-u.5   STL2P   SEC12P-like 2 protein 
 ath-u.5   PHF1   phosphate transporter traffic facilitator1 
 ath-u.5   AT5G50550   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100786727   SEC12-like protein 2 
 gma-u.5   100787360   SEC12-like protein 1 
 gma-u.5   100803472   SEC12-like protein 1 
 sly-u.5   101251489   SEC12-like protein 2 
 sly-u.5   101258215   SEC12-like protein 1 
 vvi-u.5   100251351   SEC12-like protein 1 
 vvi-u.5   100242169   SEC12-like protein 2 
 ppo-u.5   7482885   SEC12-like protein 2 
 ppo-u.5   7468459   SEC12-like protein 1 
 ppo-u.5   7475526   SEC12-like protein 2 
 mtr-u.5   25484857   SEC12-like protein 1 
 mtr-u.5   25492998   SEC12-like protein 2 

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Top 50 coexpressed genes to 8066720 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066720 (sbi-r.1 coexpression data)

CoexMap"8066720"


sbiLOC8066720 | Entrez gene ID : 8066720      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 3 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04141 [list] [network] Protein processing in endoplasmic reticulum (204 genes)
GO BP
GO:0003400 [list] [network] regulation of COPII vesicle coating  (8 genes)  IEA  
GO:0009306 [list] [network] protein secretion  (16 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (203 genes)  IEA  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (33 genes)  IEA  
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002451112.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  E.R. 1,  nucl 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_002451112.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_002451112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066720

.
zma-u.5
for
100382688

.
osa-u.5
for
4350905

.
osa-u.5
for
9270427

.
osa-u.5
for
4342601

.
ath-u.5
for
STL2P

.
ath-u.5
for
PHF1

.
ath-u.5
for
AT5G50550

.
gma-u.5
for
100786727

.
gma-u.5
for
100787360

.
gma-u.5
for
100803472

.
sly-u.5
for
101251489

.
sly-u.5
for
101258215

.
vvi-u.5
for
100251351

.
vvi-u.5
for
100242169

.
ppo-u.5
for
7482885

.
ppo-u.5
for
7468459

.
ppo-u.5
for
7475526

.
mtr-u.5
for
25484857

.
mtr-u.5
for
25492998

.


Ortholog ID: 1648
Species ath ath gma gma sly sly osa osa bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G50550 AT5G50650 LOC100786727 LOC100803472 LOC101251489 LOC101258215 LOC4342601 LOC9270427 LOC103827587 LOC103841155 LOC100251351 LOC100242169 LOC7482885 LOC7475526 LOC25492998 LOC25484857 LOC123168031 LOC123086118 LOC123410751 LOC121219417 LOC107922614 LOC106402892 LOC106367842 CHLRE_03g170350v5 LOC110431251 LOC8075043 LOC102594823 LOC102586665 LOC102609923 LOC102629777 LOC100823297 LOC100839035 LOC107783801 LOC107782035
Function* Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 2 SEC12-like protein 2 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 uncharacterized protein uncharacterized LOC110431251 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 1 SEC12-like protein 2 SEC12-like protein 1 SEC12-like protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03015 mRNA surveillance pathway 2
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03050 Proteasome 2
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo04145 Phagosome 6
ppo04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04016 MAPK signaling pathway - plant 2
tae04070 Phosphatidylinositol signaling system 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu00410 beta-Alanine metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00710 Carbon fixation by Calvin cycle 4
ghi00020 Citrate cycle (TCA cycle) 3
ghi00270 Cysteine and methionine metabolism 3
ghi00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 9
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bdi00260 Glycine, serine and threonine metabolism 3
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 2
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00566 Sulfoquinovose metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835123 835135 100786727 100803472 101251489 101258215 4342601 9270427 103827587 103841155 100251351 100242169 7482885 7475526 25492998 25484857 123168031 123086118 123410751 121219417 107922614 106402892 106367842 5728946 110431251 8075043 102594823 102586665 102609923 102629777 100823297 100839035 107783801 107782035
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