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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8068796   DNA repair protein RadA 
 zma-u.5   100384790   uncharacterized LOC100384790 
 osa-u.5   4340150   uncharacterized LOC4340150 
 ath-u.5   AT5G50340   DNA repair protein RadA-like protein 
 gma-u.5   100794165   DNA repair protein RadA 
 gma-u.5   100791181   DNA repair protein RadA 
 sly-u.5   101253170   uncharacterized LOC101253170 
 vvi-u.5   100258398   uncharacterized LOC100258398 
 ppo-u.5   7475108   uncharacterized LOC7475108 
 mtr-u.5   11427154   DNA repair protein RadA 
 mtr-u.5   11424963   DNA repair protein RadA 

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Top 50 coexpressed genes to 8068796 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068796 (sbi-r.1 coexpression data)

CoexMap"8068796"


sbiLOC8068796 | Entrez gene ID : 8068796    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000725 [list] [network] recombinational repair  (90 genes)  IEA  
GO CC
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (38 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (434 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_021305225.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_021305225.1)
Subcellular
localization
TargetP
mito 8,  chlo 5  (predict for XP_021305225.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8068796

.
zma-u.5
for
100384790

.
osa-u.5
for
4340150

.
ath-u.5
for
AT5G50340

.
gma-u.5
for
100794165

.
gma-u.5
for
100791181

.
sly-u.5
for
101253170

.
vvi-u.5
for
100258398

.
ppo-u.5
for
7475108

.
mtr-u.5
for
11427154

.
mtr-u.5
for
11424963

.


Ortholog ID: 8192
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT5G50340 LOC100794165 LOC100791181 LOC101253170 LOC4340150 LOC100384790 LOC103858447 LOC100258398 LOC7475108 LOC11427154 LOC11424963 LOC123150213 LOC123155615 LOC123408137 LOC107897358 LOC107913887 LOC106388422 LOC106388475 CHLRE_07g317908v5 LOC8068796 LOC102603127 LOC102628276 LOC100824150 LOC100840689 LOC107830621 LOC107793634
Function* DNA repair protein RadA-like protein DNA repair protein RadA DNA repair protein RadA uncharacterized LOC101253170 uncharacterized LOC4340150 uncharacterized LOC100384790 DNA repair protein RadA uncharacterized LOC100258398 uncharacterized LOC7475108 DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA-like DNA repair protein RadA DNA repair protein RadA-like uncharacterized protein DNA repair protein RadA DNA repair protein RadA homolog uncharacterized LOC102628276 DNA repair protein RadA DNA repair protein RadA-like uncharacterized LOC107830621 uncharacterized LOC107793634
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 3
ppo03460 Fanconi anemia pathway 2
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 4
mtr03030 DNA replication 3
mtr03460 Fanconi anemia pathway 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835101 100794165 100791181 101253170 4340150 100384790 103858447 100258398 7475108 11427154 11424963 123150213 123155615 123408137 107897358 107913887 106388422 106388475 5726556 8068796 102603127 102628276 100824150 100840689 107830621 107793634
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