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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273409   uncharacterized LOC100273409 
 zma-u.5   103654420   probable E3 ubiquitin-protein ligase ARI8 
 zma-u.5   103648198   uncharacterized LOC103648198 
 osa-u.5   4347561   probable E3 ubiquitin-protein ligase ARI8 
 osa-u.5   4346186   probable E3 ubiquitin-protein ligase ARI8 
 ath-u.5   ARI7   IBR domain-containing protein 
 ath-u.5   ARI8   IBR domain-containing protein 
 ath-u.5   ARI5   RING/U-box superfamily protein 
 gma-u.5   ARI3   putative E3 ubiquitin-protein ligase ARI3 
 gma-u.5   ARI2   putative E3 ubiquitin-protein ligase ARI2 
 gma-u.5   100810427   probable E3 ubiquitin-protein ligase ARI7 
 sly-u.5   101262146   probable E3 ubiquitin-protein ligase ARI7 
 sly-u.5   101250704   probable E3 ubiquitin-protein ligase ARI7 
 sly-u.5   101248534   probable E3 ubiquitin-protein ligase ARI8 
 vvi-u.5   100257000   probable E3 ubiquitin-protein ligase ARI8 
 vvi-u.5   100262873   probable E3 ubiquitin-protein ligase ARI7 
 ppo-u.5   7464600   probable E3 ubiquitin-protein ligase ARI8 
 ppo-u.5   7472462   probable E3 ubiquitin-protein ligase ARI8 
 ppo-u.5   18106936   probable E3 ubiquitin-protein ligase ARI7 
 mtr-u.5   11431423   probable E3 ubiquitin-protein ligase ARI7 
 mtr-u.5   11411243   probable E3 ubiquitin-protein ligase ARI8 
 mtr-u.5   25492643   probable E3 ubiquitin-protein ligase ARI7 

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Top 50 coexpressed genes to 100273409 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273409 (zma-u.5 coexpression data)

CoexMap"8070197"


sbiLOC8070197 | Entrez gene ID : 8070197    
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (28 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (65 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (143 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (30 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (192 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
Protein XP_021317847.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 2,  cyto_nucl 2  (predict for XP_021317847.1)
Subcellular
localization
TargetP
other 7  (predict for XP_021317847.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273409

.
zma-u.5
for
103654420

.
zma-u.5
for
103648198

.
osa-u.5
for
4347561

.
osa-u.5
for
4346186

.
ath-u.5
for
ARI7

.
ath-u.5
for
ARI8

.
ath-u.5
for
ARI5

.
gma-u.5
for
ARI3

.
gma-u.5
for
ARI2

.
gma-u.5
for
100810427

.
sly-u.5
for
101262146

.
sly-u.5
for
101250704

.
sly-u.5
for
101248534

.
vvi-u.5
for
100257000

.
vvi-u.5
for
100262873

.
ppo-u.5
for
7464600

.
ppo-u.5
for
7472462

.
ppo-u.5
for
18106936

.
mtr-u.5
for
11431423

.
mtr-u.5
for
11411243

.
mtr-u.5
for
25492643

.


Ortholog ID: 744
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna cre sbi sot sot cit cit bdi nta nta
Symbol ARI7 ARI2 ARI1 LOC101248534 LOC101262146 LOC4346186 LOC4336253 LOC100273409 LOC103645186 LOC103865131 LOC100262873 LOC100257000 LOC18106936 LOC7472462 LOC11426565 LOC11411243 LOC123144752 LOC123156284 LOC123404046 LOC123407387 LOC121206293 LOC107893787 LOC106397455 CHLRE_16g682350v5 LOC8060188 LOC102595867 LOC102579650 LOC102630454 LOC102619087 LOC100823610 LOC107798305 LOC107759684
Function* IBR domain-containing protein putative E3 ubiquitin-protein ligase ARI2 putative E3 ubiquitin-protein ligase ARI1 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 uncharacterized LOC100273409 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI12 uncharacterized protein probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI8 probable E3 ubiquitin-protein ligase ARI7 probable E3 ubiquitin-protein ligase ARI7 putative E3 ubiquitin-protein ligase ARI7 putative E3 ubiquitin-protein ligase ARI8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 9
ghi00260 Glycine, serine and threonine metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 6
ghi01200 Carbon metabolism 6
ghi00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03040 Spliceosome 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817709 100795162 100784195 101248534 101262146 4346186 4336253 100273409 103645186 103865131 100262873 100257000 18106936 7472462 11426565 11411243 123144752 123156284 123404046 123407387 121206293 107893787 106397455 5717571 8060188 102595867 102579650 102630454 102619087 100823610 107798305 107759684
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