Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8070958   2,3-dimethylmalate lyase 
 zma-u.5   100194050   Phosphoenolpyruvate carboxylase family protein 
 zma-u.5   100277287   uncharacterized LOC100277287 
 osa-u.5   4335655   uncharacterized LOC4335655 
 osa-u.5   4336329   uncharacterized LOC4336329 
 ath-u.5   AT2G43180   Phosphoenolpyruvate carboxylase family protein 
 gma-u.5   100818553   ICL/PEPM domain-containing protein 
 gma-u.5   100806389   2,3-dimethylmalate lyase 
 sly-u.5   101247324   uncharacterized LOC101247324 
 vvi-u.5   100244697   uncharacterized LOC100244697 
 ppo-u.5   7466177   uncharacterized LOC7466177 
 mtr-u.5   120576929   2,3-dimethylmalate lyase 
 mtr-u.5   11408481   2,3-dimethylmalate lyase 

close


Top 50 coexpressed genes to 8070958 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8070958 (sbi-r.1 coexpression data)

CoexMap"8070958"


sbiLOC8070958 | Entrez gene ID : 8070958      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003824 [list] [network] catalytic activity  (8648 genes)  IEA  
Protein XP_002447699.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 1,  chlo_mito 1,  pero 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002447699.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002447699.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8070958

.
zma-u.5
for
100194050

.
zma-u.5
for
100277287

.
osa-u.5
for
4335655

.
osa-u.5
for
4336329

.
ath-u.5
for
AT2G43180

.
gma-u.5
for
100818553

.
gma-u.5
for
100806389

.
sly-u.5
for
101247324

.
vvi-u.5
for
100244697

.
ppo-u.5
for
7466177

.
mtr-u.5
for
120576929

.
mtr-u.5
for
11408481

.


Ortholog ID: 5974
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT2G43180 LOC100818553 LOC100806389 LOC101247324 LOC4335655 LOC4336329 LOC100194050 LOC100277287 LOC103858053 LOC100244697 LOC7466177 LOC11408481 LOC120576929 LOC123053835 LOC123189049 LOC123427183 LOC123426534 LOC121206296 LOC107890531 LOC106388308 LOC125606864 CHLRE_03g149250v5 LOC8070958 LOC8060218 LOC102580274 LOC102624317 LOC100828754 LOC100833450 LOC107809819 LOC107765651
Function* Phosphoenolpyruvate carboxylase family protein ICL/PEPM domain-containing protein 2,3-dimethylmalate lyase uncharacterized LOC101247324 uncharacterized LOC4335655 uncharacterized LOC4336329 Phosphoenolpyruvate carboxylase family protein uncharacterized LOC100277287 2,3-dimethylmalate lyase uncharacterized LOC100244697 uncharacterized LOC7466177 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase-like 2,3-dimethylmalate lyase-like 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase-like uncharacterized protein 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase-like uncharacterized LOC102624317 2,3-dimethylmalate lyase 2,3-dimethylmalate lyase uncharacterized LOC107809819 uncharacterized LOC107765651
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00300 Lysine biosynthesis 2
gma00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 9
osa00340 Histidine metabolism 2
osa00300 Lysine biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
zma04146 Peroxisome 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00561 Glycerolipid metabolism 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr03013 Nucleocytoplasmic transport 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 6
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00460 Cyanoamino acid metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 3
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00620 Pyruvate metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03083 Polycomb repressive complex 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00500 Starch and sucrose metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 3
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818919 100818553 100806389 101247324 4335655 4336329 100194050 100277287 103858053 100244697 7466177 11408481 120576929 123053835 123189049 123427183 123426534 121206296 107890531 106388308 125606864 5721172 8070958 8060218 102580274 102624317 100828754 100833450 107809819 107765651
The preparation time of this page was 0.1 [sec].