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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8071867   flowering time control protein FPA 
 zma-u.5   100383418   flowering time control protein FPA 
 osa-u.5   4346659   flowering time control protein FPA 
 ath-u.5   AT4G12640   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100816831   flowering time control protein FPA 
 gma-u.5   100811668   flowering time control protein FPA 
 sly-u.5   101262385   flowering time control protein FPA 
 vvi-u.5   100249524   flowering time control protein FPA 
 ppo-u.5   7456026   flowering time control protein FPA 
 mtr-u.5   11427549   flowering time control protein FPA 

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Top 50 coexpressed genes to 8071867 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8071867 (sbi-r.1 coexpression data)

CoexMap"8071867"


sbiLOC8071867 | Entrez gene ID : 8071867      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002462146.2 [sequence] [blastp]
XP_021308822.1 [sequence] [blastp]
XP_021308823.1 [sequence] [blastp]
XP_021308824.1 [sequence] [blastp]
XP_021308825.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_002462146.2)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_021308822.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_021308823.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_021308824.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_021308825.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_002462146.2)
other 7,  mito 3  (predict for XP_021308822.1)
other 7,  mito 3  (predict for XP_021308823.1)
other 7,  mito 3  (predict for XP_021308824.1)
other 7,  mito 3  (predict for XP_021308825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8071867

.
zma-u.5
for
100383418

.
osa-u.5
for
4346659

.
ath-u.5
for
AT4G12640

.
gma-u.5
for
100816831

.
gma-u.5
for
100811668

.
sly-u.5
for
101262385

.
vvi-u.5
for
100249524

.
ppo-u.5
for
7456026

.
mtr-u.5
for
11427549

.


Ortholog ID: 9565
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G12640 LOC100811668 LOC100816831 LOC101262385 LOC4346659 LOC100383418 LOC103872442 LOC100249524 LOC7456026 LOC11427549 LOC123103456 LOC123121125 LOC123452410 LOC107961618 LOC107916377 LOC106346765 LOC106446425 CHLRE_09g389838v5 LOC8071867 LOC102593682 LOC102624460 LOC100824421 LOC107815975 LOC107821025
Function* RNA recognition motif (RRM)-containing protein flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA uncharacterized LOC103872442 flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA uncharacterized LOC106346765 flowering time control protein FPA uncharacterized protein flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826877 100811668 100816831 101262385 4346659 100383418 103872442 100249524 7456026 11427549 123103456 123121125 123452410 107961618 107916377 106346765 106446425 5720620 8071867 102593682 102624460 100824421 107815975 107821025
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