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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072021   60S ribosomal protein L12-1 
 zma-u.5   100281960   60S ribosomal protein L12 
 zma-u.5   103641586   60S ribosomal protein L12 
 zma-u.5   100282351   60S ribosomal protein L12-like 
 osa-u.5   4330425   large ribosomal subunit protein uL11z 
 osa-u.5   4336856   large ribosomal subunit protein uL11 
 ath-u.5   AT2G37190   Ribosomal protein L11 family protein 
 ath-u.5   AT3G53430   Ribosomal protein L11 family protein 
 ath-u.5   AT5G60670   Ribosomal protein L11 family protein 
 gma-u.5   100789561   60S ribosomal protein L12 
 gma-u.5   100527860   60S ribosomal protein L12 
 gma-u.5   100811654   ribosomal protein L11 family protein 
 sly-u.5   101247691   large ribosomal subunit protein uL11 
 sly-u.5   101259021   large ribosomal subunit protein uL11 
 sly-u.5   101262318   large ribosomal subunit protein uL11 
 vvi-u.5   100853149   large ribosomal subunit protein uL11 
 vvi-u.5   100267052   60S ribosomal protein L12-like 
 vvi-u.5   100244384   60S ribosomal protein L12-like 
 ppo-u.5   18107840   60S ribosomal protein L12 
 ppo-u.5   18107841   60S ribosomal protein L12 
 mtr-u.5   11412068   60S ribosomal protein L12-3 
 mtr-u.5   25484005   60S ribosomal protein L12 

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Top 50 coexpressed genes to 8072021 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072021 (sbi-r.1 coexpression data)

CoexMap"8072021"


sbiLOC8072021 | Entrez gene ID : 8072021      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 3 3 3 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (12 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002446345.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for XP_002446345.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002446345.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072021

.
zma-u.5
for
100281960

.
zma-u.5
for
103641586

.
zma-u.5
for
100282351

.
osa-u.5
for
4330425

.
osa-u.5
for
4336856

.
ath-u.5
for
AT2G37190

.
ath-u.5
for
AT3G53430

.
ath-u.5
for
AT5G60670

.
gma-u.5
for
100789561

.
gma-u.5
for
100527860

.
gma-u.5
for
100811654

.
sly-u.5
for
101247691

.
sly-u.5
for
101259021

.
sly-u.5
for
101262318

.
vvi-u.5
for
100853149

.
vvi-u.5
for
100267052

.
vvi-u.5
for
100244384

.
ppo-u.5
for
18107840

.
ppo-u.5
for
18107841

.
mtr-u.5
for
11412068

.
mtr-u.5
for
25484005

.


Ortholog ID: 1378
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G60670 AT2G37190 LOC100789561 LOC100811654 LOC101259021 LOC101247691 LOC4330425 LOC4336856 LOC100281960 LOC100216970 LOC103845481 LOC103863412 LOC100267052 LOC100853149 LOC7485512 LOC18109584 LOC11412068 LOC123128089 LOC123190327 LOC123401220 LOC123427762 LOC107930650 LOC106371617 LOC106447395 CHLRE_12g528750v5 LOC8072021 LOC8073879 LOC102600463 LOC102589601 LOC102627399 LOC102610083 LOC100839822 LOC100839364 LOC107764287 LOC107763560
Function* Ribosomal protein L11 family protein Ribosomal protein L11 family protein 60S ribosomal protein L12 ribosomal protein L11 family protein large ribosomal subunit protein uL11 large ribosomal subunit protein uL11 large ribosomal subunit protein uL11z large ribosomal subunit protein uL11 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-2 60S ribosomal protein L12-like large ribosomal subunit protein uL11 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-3-like 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-2-like ribosomal protein L12 60S ribosomal protein L12-1 60S ribosomal protein L12-1 60S ribosomal protein L12-like 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12-3 large ribosomal subunit protein uL11 large ribosomal subunit protein uL11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi03015 mRNA surveillance pathway 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00860 Porphyrin metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836188 818295 100789561 100811654 101259021 101247691 4330425 4336856 100281960 100216970 103845481 103863412 100267052 100853149 7485512 18109584 11412068 123128089 123190327 123401220 123427762 107930650 106371617 106447395 5722438 8072021 8073879 102600463 102589601 102627399 102610083 100839822 100839364 107764287 107763560
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