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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072343   gamma-aminobutyrate transaminase 1, mitochondrial 
 zma-u.5   100282236   aminotransferase y4uB 
 zma-u.5   100286148   aminotransferase y4uB 
 zma-u.5   103645944   gamma-aminobutyrate transaminase 1, mitochondrial 
 osa-u.5   4336982   probable gamma-aminobutyrate transaminase 2, mitochondrial 
 osa-u.5   4336983   gamma-aminobutyrate transaminase 1, mitochondrial-like 
 osa-u.5   4344928   probable gamma-aminobutyrate transaminase 3, mitochondrial 
 ath-u.5   POP2   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 gma-u.5   100815181   gamma aminobutyrate transaminase 3, chloroplastic 
 gma-u.5   100792355   gamma aminobutyrate transaminase 3, chloroplastic 
 sly-u.5   GABA-TP1   gamma-aminobutyrate transaminase subunit precursor isozyme 1 
 sly-u.5   101258391   vanillin aminotransferase 
 sly-u.5   GABA-TP2   gamma aminobutyrate transaminase 2 
 vvi-u.5   100248495   vanillin aminotransferase 
 ppo-u.5   7495636   gamma aminobutyrate transaminase 1, mitochondrial 
 ppo-u.5   7455851   gamma aminobutyrate transaminase 3, chloroplastic 
 mtr-u.5   11438136   vanillin aminotransferase 

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Top 50 coexpressed genes to 8072343 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072343 (sbi-r.1 coexpression data)

CoexMap"8072343"


sbiLOC8072343 | Entrez gene ID : 8072343      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 1 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00250 [list] [network] Alanine, aspartate and glutamate metabolism (49 genes)
sbi00650 [list] [network] Butanoate metabolism (27 genes)
GO BP
GO:0009448 [list] [network] gamma-aminobutyric acid metabolic process  (4 genes)  IEA  
GO:0009102 [list] [network] biotin biosynthetic process  (5 genes)  IEA  
GO CC
GO MF
GO:0004015 [list] [network] adenosylmethionine-8-amino-7-oxononanoate transaminase activity  (4 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (85 genes)  IEA  
Protein XP_002447091.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002447091.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002447091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072343

.
zma-u.5
for
100282236

.
zma-u.5
for
100286148

.
zma-u.5
for
103645944

.
osa-u.5
for
4336982

.
osa-u.5
for
4336983

.
osa-u.5
for
4344928

.
ath-u.5
for
POP2

.
gma-u.5
for
100815181

.
gma-u.5
for
100792355

.
sly-u.5
for
GABA-TP1

.
sly-u.5
for
101258391

.
sly-u.5
for
GABA-TP2

.
vvi-u.5
for
100248495

.
ppo-u.5
for
7495636

.
ppo-u.5
for
7455851

.
mtr-u.5
for
11438136

.


Ortholog ID: 3339
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol POP2 LOC100792355 LOC100815181 GABA-TP3 GABA-TP1 LOC4336982 LOC4336983 LOC100282236 LOC100286148 LOC103834779 LOC103869111 LOC100248495 LOC7455851 LOC7495636 LOC11438136 LOC100682496 LOC123165077 LOC123413507 LOC123427606 LOC107924570 LOC106345502 LOC111202360 LOC8071169 LOC8072343 LOC102599962 LOC102596238 LOC102624895 LOC100831754 LOC100839166 LOC107759660 LOC107812914
Function* Pyridoxal phosphate (PLP)-dependent transferases superfamily protein gamma aminobutyrate transaminase 3, chloroplastic gamma aminobutyrate transaminase 3, chloroplastic gamma-aminobutyrate transaminase subunit precursor isozyme 3 gamma-aminobutyrate transaminase subunit precursor isozyme 1 probable gamma-aminobutyrate transaminase 2, mitochondrial gamma-aminobutyrate transaminase 1, mitochondrial-like aminotransferase y4uB aminotransferase y4uB gamma-aminobutyrate transaminase POP2, mitochondrial gamma-aminobutyrate transaminase POP2, mitochondrial vanillin aminotransferase gamma aminobutyrate transaminase 3, chloroplastic gamma aminobutyrate transaminase 1, mitochondrial vanillin aminotransferase gamma-aminobutyrate transaminase 1, mitochondrial probable gamma-aminobutyrate transaminase 3, mitochondrial probable gamma-aminobutyrate transaminase 3, mitochondrial gamma-aminobutyrate transaminase 1, mitochondrial gamma aminobutyrate transaminase 3, chloroplastic gamma-aminobutyrate transaminase POP2, mitochondrial gamma-aminobutyrate transaminase POP2, mitochondrial probable gamma-aminobutyrate transaminase 3, mitochondrial gamma-aminobutyrate transaminase 1, mitochondrial gamma aminobutyrate transaminase 1, mitochondrial gamma aminobutyrate transaminase 3, chloroplastic gamma aminobutyrate transaminase 3, chloroplastic probable gamma-aminobutyrate transaminase 3, mitochondrial gamma-aminobutyrate transaminase 1, mitochondrial vanillin aminotransferase-like vanillin aminotransferase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00280 Valine, leucine and isoleucine degradation 6
ath04146 Peroxisome 5
ath01210 2-Oxocarboxylic acid metabolism 5
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00380 Tryptophan metabolism 3
gma00250 Alanine, aspartate and glutamate metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00380 Tryptophan metabolism 3
gma00250 Alanine, aspartate and glutamate metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00052 Galactose metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
sly00270 Cysteine and methionine metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00071 Fatty acid degradation 5
osa01212 Fatty acid metabolism 5
osa00650 Butanoate metabolism 4
osa04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 3
zma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 7
bra00640 Propanoate metabolism 4
bra00410 beta-Alanine metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 3
ppo00270 Cysteine and methionine metabolism 3
ppo01200 Carbon metabolism 3
ppo04136 Autophagy - other 2
ppo00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04148 Efferocytosis 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00410 beta-Alanine metabolism 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 2
tae00650 Butanoate metabolism 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 5
hvu00640 Propanoate metabolism 4
hvu04146 Peroxisome 3
hvu00785 Lipoic acid metabolism 3
hvu01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00052 Galactose metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00600 Sphingolipid metabolism 2
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00650 Butanoate metabolism 5
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00650 Butanoate metabolism 5
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00330 Arginine and proline metabolism 3
sbi00250 Alanine, aspartate and glutamate metabolism 3
sbi00650 Butanoate metabolism 2
sbi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 9
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00330 Arginine and proline metabolism 2
cit00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00450 Selenocompound metabolism 2
bdi00920 Sulfur metabolism 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 6
bdi00640 Propanoate metabolism 2
bdi00785 Lipoic acid metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 5
nta00650 Butanoate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 5
nta00650 Butanoate metabolism 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821784 100792355 100815181 544258 543873 4336982 4336983 100282236 100286148 103834779 103869111 100248495 7455851 7495636 11438136 100682496 123165077 123413507 123427606 107924570 106345502 111202360 8071169 8072343 102599962 102596238 102624895 100831754 100839166 107759660 107812914
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