ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8073228	achilleol B synthase
sbi-r.1	110436943	achilleol B synthase-like
zma-u.5	100382426	Cycloartenol synthase
zma-u.5	100382158	uncharacterized LOC100382158
zma-u.5	103654926	cycloartenol synthase
osa-u.5	4350734	achilleol B synthase-like
osa-u.5	4350295	achilleol B synthase-like
tae-r.2	123132191	achilleol B synthase
tae-r.2	123132185	cycloartenol synthase
hvu-r.1	123406116	cycloartenol synthase
bdi-r.1	100844079	cycloartenol synthase
bdi-r.1	100843581	cycloartenol synthase
bdi-r.1	100843077	cycloartenol synthase
ath-u.5	LUP1	lupeol synthase 1
ath-u.5	LUP2	lupeol synthase 2
ath-u.5	CAMS1	camelliol C synthase 1
gma-u.5	100810544	beta-amyrin synthase
gma-u.5	100810400	lupeol synthase
gma-u.5	100809670	beta-amyrin synthase
sly-u.5	lTTS1	beta-amyrin synthase
sly-u.5	TTS2	delta-amyrin synthase
sly-u.5	CAS1	cycloartenol synthase
bra-r.6	103828738	cycloartenol synthase
bra-r.6	103830506	amyrin synthase LUP2
bra-r.6	103832374	amyrin synthase LUP2
vvi-u.5	100261496	beta-amyrin synthase 1-like
vvi-u.5	100241546	lupeol synthase
vvi-u.5	100243389	cycloartenol Synthase
ppo-u.5	18094524	lupeol synthase
mtr-u.5	11428926	cycloartenol synthase
mtr-u.5	11428611	mixed-amyrin synthase
mtr-u.5	11427580	cycloartenol synthase-like
ghi-r.1	107901998	lupeol synthase
ghi-r.1	107906370	cycloartenol synthase
ghi-r.1	107906373	beta-amyrin synthase
bna-r.1	106389426	cycloartenol synthase
bna-r.1	111213217	cycloartenol synthase-like
bna-r.1	125608837	seco-amyrin synthase-like
sot-r.1	102600538	beta-amyrin synthase-like
sot-r.1	102600122	beta-amyrin synthase-like
sot-r.1	102594718	cycloartenol synthase 2-like
cit-r.1	102610340	beta-amyrin synthase-like
cit-r.1	102618743	beta-amyrin synthase-like
cit-r.1	102624399	cycloartenol synthase-like
nta-r.1	107762202	beta-amyrin synthase
nta-r.1	107762593	cycloartenol Synthase-like
nta-r.1	107762781	beta-amyrin synthase
cre-r.1	CHLRE_01g011100v5	uncharacterized protein

Top 50 coexpressed genes to 8073228 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8073228 (sbi-r.1 coexpression data)

CoexMap"8073228"

[Cytoscape]

Annotation

functional annotation

KEGG

sbi00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (16 genes)

GO BP

GO:0016104 [list] [network] triterpenoid biosynthetic process

(16 genes)

IEA

GO CC

GO:0005811 [list] [network] lipid droplet

(26 genes)

IEA

GO MF

GO:0016866 [list] [network] intramolecular transferase activity

(55 genes)

IEA

Protein

XP_002445263.1 [sequence] [blastp]
XP_021321010.1 [sequence] [blastp]
XP_021321011.1 [sequence] [blastp]
XP_021321012.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, E.R. 2, nucl 1, mito 1, E.R._vacu 1, E.R._plas 1	(predict for XP_002445263.1)
chlo 3, E.R. 3, mito 1, plas 1, mito_plas 1, cyto_E.R. 1	(predict for XP_021321010.1)
chlo 4, E.R. 2, mito 1, plas 1, E.R._vacu 1, mito_plas 1	(predict for XP_021321011.1)
chlo 4, E.R. 3, mito 1, cyto_E.R. 1	(predict for XP_021321012.1)

Subcellular
localization
TargetP

mito 7, other 4	(predict for XP_002445263.1)
mito 7, other 3	(predict for XP_021321010.1)
mito 7, other 4	(predict for XP_021321011.1)
mito 7, other 3	(predict for XP_021321012.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8073228	sbi-r.1 for 110436943	zma-u.5 for 100382426	zma-u.5 for 100382158	zma-u.5 for 103654926	osa-u.5 for 4350734	osa-u.5 for 4350295	tae-r.2 for 123132191	tae-r.2 for 123132185	hvu-r.1 for 123406116	bdi-r.1 for 100844079	bdi-r.1 for 100843581	bdi-r.1 for 100843077	ath-u.5 for LUP1	ath-u.5 for LUP2	ath-u.5 for CAMS1	gma-u.5 for 100810544	gma-u.5 for 100810400	gma-u.5 for 100809670	sly-u.5 for lTTS1	sly-u.5 for TTS2	sly-u.5 for CAS1	bra-r.6 for 103828738	bra-r.6 for 103830506	bra-r.6 for 103832374	vvi-u.5 for 100261496	vvi-u.5 for 100241546	vvi-u.5 for 100243389	ppo-u.5 for 18094524	mtr-u.5 for 11428926	mtr-u.5 for 11428611	mtr-u.5 for 11427580	ghi-r.1 for 107901998	ghi-r.1 for 107906370	ghi-r.1 for 107906373	bna-r.1 for 106389426	bna-r.1 for 111213217	bna-r.1 for 125608837	sot-r.1 for 102600538	sot-r.1 for 102600122	sot-r.1 for 102594718	cit-r.1 for 102610340	cit-r.1 for 102618743	cit-r.1 for 102624399	nta-r.1 for 107762202	nta-r.1 for 107762593	nta-r.1 for 107762781	cre-r.1 for CHLRE_01g011100v5

Ortholog

Ortholog ID: 225

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

LUP5

LAS1

CAS1

LOC100810544

LOC100794151

LOC100784662

CAS1

LAS

OSC1

Function^*

achilleol B synthase

cycloartenol synthase

uncharacterized LOC100193317

achilleol B synthase-like

cycloartenol synthase-like

cycloartenol synthase

achilleol B synthase-like

achilleol B synthase

Terpenoid cyclases family protein

lanosterol synthase 1

cycloartenol synthase 1

beta-amyrin synthase

lupeol synthase

cycloartenol synthase

lanosterol synthase-like

oxidosqualene cyclase 1

cycloartenol synthase

amyrin synthase LUP2

beta-amyrin synthase 1

beta-amyrin synthase

beta-amyrin synthase 1

cycloartenol synthase

beta-amyrin synthase

mixed-amyrin synthase

beta-amyrin synthase

lupeol synthase

cycloartenol synthase 2

lupeol synthase

cycloartenol synthase

beta-amyrin synthase 1

cycloartenol Synthase-like

beta-amyrin synthase

cycloartenol synthase 2

cycloartenol synthase-like

beta-amyrin synthase 1-like

beta-amyrin synthase

cycloartenol Synthase-like

cycloartenol Synthase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	3
sbi04146	Peroxisome	3
sbi03013	Nucleocytoplasmic transport	2
sbi00062	Fatty acid elongation	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00100	Steroid biosynthesis	4
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma02010	ABC transporters	2
zma04981	Folate transport and metabolism	2
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00330	Arginine and proline metabolism	3
tae00620	Pyruvate metabolism	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	7
ath01200	Carbon metabolism	7
ath00010	Glycolysis / Gluconeogenesis	5
ath00020	Citrate cycle (TCA cycle)	4
ath00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	4
gma00999	Biosynthesis of various plant secondary metabolites	3
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	8
sly00280	Valine, leucine and isoleucine degradation	2
sly00620	Pyruvate metabolism	2
sly00650	Butanoate metabolism	2
sly00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	4
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00900	Terpenoid backbone biosynthesis	2
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	4
vvi00999	Biosynthesis of various plant secondary metabolites	4
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04626	Plant-pathogen interaction	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	8
mtr00999	Biosynthesis of various plant secondary metabolites	5
mtr00100	Steroid biosynthesis	3
mtr00280	Valine, leucine and isoleucine degradation	2
mtr00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	5
mtr00999	Biosynthesis of various plant secondary metabolites	5
mtr00280	Valine, leucine and isoleucine degradation	2
mtr00650	Butanoate metabolism	2
mtr00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04081	Hormone signaling	4
ghi00062	Fatty acid elongation	2
ghi04626	Plant-pathogen interaction	2
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00100	Steroid biosynthesis	6
ghi00061	Fatty acid biosynthesis	2
ghi00780	Biotin metabolism	2
ghi01212	Fatty acid metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04081	Hormone signaling	4
ghi00062	Fatty acid elongation	2
ghi04626	Plant-pathogen interaction	2
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00100	Steroid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6
bna04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00061	Fatty acid biosynthesis	3
sot00620	Pyruvate metabolism	3
sot01200	Carbon metabolism	3
sot01212	Fatty acid metabolism	3
sot00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00909	Sesquiterpenoid and triterpenoid biosynthesis	4
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2
cit00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	4
nta00999	Biosynthesis of various plant secondary metabolites	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	6
nta00190	Oxidative phosphorylation	5
nta04145	Phagosome	5
nta01230	Biosynthesis of amino acids	3
nta00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00100	Steroid biosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

8073228

8067848

8072983

103654926

100193317

4350734

4328256

123132185

123406116

123411732

100827654

843014

823649

815275

100810544

100794151

100784662

100147715

101261713

101265842

103828738

103832374

100249623

100259856

100254746

7485522

7465577

11428611

25490441

107901998

107926281

107962932

106439781

106353429

102581012

102592553

102616606

102615312

102609708

107762202

107806219

107826198

5715025

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	1	3	3	3	3	3	3	1	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8073228 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8073228 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**