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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073897   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 zma-u.5   103653935   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 zma-u.5   100216988   uncharacterized LOC100216988 
 osa-u.5   4330371   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ath-u.5   PIE1   SNF2 domain-containing protein / helicase domain-containing protein 
 gma-u.5   100795613   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 gma-u.5   100794898   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 sly-u.5   101248082   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 vvi-u.5   100248703   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ppo-u.5   18094897   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ppo-u.5   7478135   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 mtr-u.5   25483514   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 

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Top 50 coexpressed genes to 8073897 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073897 (sbi-r.1 coexpression data)

CoexMap"8073897"


sbiLOC8073897 | Entrez gene ID : 8073897    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03082 [list] [network] ATP-dependent chromatin remodeling (65 genes)
GO BP
GO CC
GO:0000812 [list] [network] Swr1 complex  (8 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (42 genes)  IEA  
GO:0042393 [list] [network] histone binding  (50 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (434 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_021315434.1 [sequence] [blastp]
XP_021315435.1 [sequence] [blastp]
XP_021315436.1 [sequence] [blastp]
XP_021315437.1 [sequence] [blastp]
XP_021315438.1 [sequence] [blastp]
XP_021315439.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_021315434.1)
nucl 9  (predict for XP_021315435.1)
nucl 9  (predict for XP_021315436.1)
nucl 9  (predict for XP_021315437.1)
nucl 9  (predict for XP_021315438.1)
nucl 9  (predict for XP_021315439.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_021315434.1)
other 3,  chlo 3  (predict for XP_021315435.1)
other 3,  chlo 3  (predict for XP_021315436.1)
other 3,  chlo 3  (predict for XP_021315437.1)
other 3,  chlo 3  (predict for XP_021315438.1)
other 3,  chlo 3  (predict for XP_021315439.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073897

.
zma-u.5
for
103653935

.
zma-u.5
for
100216988

.
osa-u.5
for
4330371

.
ath-u.5
for
PIE1

.
gma-u.5
for
100795613

.
gma-u.5
for
100794898

.
sly-u.5
for
101248082

.
vvi-u.5
for
100248703

.
ppo-u.5
for
18094897

.
ppo-u.5
for
7478135

.
mtr-u.5
for
25483514

.


Ortholog ID: 8454
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol PIE1 LOC100794898 LOC100795613 LOC101248082 LOC4330371 LOC103653935 LOC100216988 LOC103870222 LOC100248703 LOC18094897 LOC7478135 LOC25483514 LOC123163189 LOC123170204 LOC123407774 LOC107928336 LOC107909111 LOC106389841 LOC106452362 CHLRE_14g618860v5 LOC8073897 LOC102593766 LOC102629545 LOC100831848 LOC100821638 LOC107780070 LOC107805182
Function* SNF2 domain-containing protein / helicase domain-containing protein protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 uncharacterized LOC100216988 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 uncharacterized protein protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03015 mRNA surveillance pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820463 100794898 100795613 101248082 4330371 103653935 100216988 103870222 100248703 18094897 7478135 25483514 123163189 123170204 123407774 107928336 107909111 106389841 106452362 5715866 8073897 102593766 102629545 100831848 100821638 107780070 107805182
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