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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074641   probable E3 ubiquitin-protein ligase HIP1 
 osa-u.5   4328312   probable E3 ubiquitin-protein ligase RHG1A 
 osa-u.5   4341936   uncharacterized LOC4341936 
 ath-u.5   AT4G31450   RING/U-box superfamily protein 
 ath-u.5   AT5G10650   RING/U-box superfamily protein 
 ath-u.5   AT5G24870   RING/U-box superfamily protein 
 gma-u.5   100819874   E3 ubiquitin-protein ligase MBR2 
 gma-u.5   100812055   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100803211   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101266656   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101255868   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100245643   uncharacterized LOC100245643 
 ppo-u.5   18107536   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   18100754   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11433343   uncharacterized LOC11433343 
 mtr-u.5   25490046   E3 ubiquitin-protein ligase MBR2 

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Top 50 coexpressed genes to 8074641 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074641 (sbi-r.1 coexpression data)

CoexMap"8074641"


sbiLOC8074641 | Entrez gene ID : 8074641      
Species sbi osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot zma tae bna ghi
Paralog 1 2 3 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (192 genes)  IEA  
Protein XP_002451554.1 [sequence] [blastp]
XP_021315010.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for XP_002451554.1)
nucl 9  (predict for XP_021315010.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002451554.1)
other 4,  chlo 3  (predict for XP_021315010.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074641

.
osa-u.5
for
4328312

.
osa-u.5
for
4341936

.
ath-u.5
for
AT4G31450

.
ath-u.5
for
AT5G10650

.
ath-u.5
for
AT5G24870

.
gma-u.5
for
100819874

.
gma-u.5
for
100812055

.
gma-u.5
for
100803211

.
sly-u.5
for
101266656

.
sly-u.5
for
101255868

.
vvi-u.5
for
100245643

.
ppo-u.5
for
18107536

.
ppo-u.5
for
18100754

.
mtr-u.5
for
11433343

.
mtr-u.5
for
25490046

.


Ortholog ID: 1632
Species ath ath gma gma sly sly osa osa bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT5G24870 AT4G31450 LOC100787213 LOC100812055 LOC101255868 LOC101266656 LOC4328312 LOC4341936 LOC103855877 LOC103862052 LOC100245643 LOC18100754 LOC18107536 LOC25490046 LOC11433343 LOC123160576 LOC123136313 LOC123411230 LOC123401689 LOC107932989 LOC107902017 LOC106412562 LOC106420498 LOC8063811 LOC8074641 LOC102581264 LOC102582551 LOC102627859 LOC100824004 LOC100835307 LOC107766429 LOC107799480
Function* RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC4341936 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase Iruka uncharacterized LOC100245643 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 uncharacterized LOC11433343 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase RLIM-like uncharacterized LOC123401689 uncharacterized LOC107932989 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase Iruka uncharacterized LOC8063811 probable E3 ubiquitin-protein ligase HIP1 uncharacterized protein DDB_G0292642-like E3 ubiquitin-protein ligase RLIM hypothetical protein uncharacterized LOC100824004 E3 ubiquitin-protein ligase Praja-1 uncharacterized LOC107766429 uncharacterized LOC107799480
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 4
osa01212 Fatty acid metabolism 4
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04626 Plant-pathogen interaction 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00280 Valine, leucine and isoleucine degradation 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00910 Nitrogen metabolism 2
nta04075 Plant hormone signal transduction 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832556 829272 100787213 100812055 101255868 101266656 4328312 4341936 103855877 103862052 100245643 18100754 18107536 25490046 11433343 123160576 123136313 123411230 123401689 107932989 107902017 106412562 106420498 8063811 8074641 102581264 102582551 102627859 100824004 100835307 107766429 107799480
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