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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074878   probable ATP-dependent RNA helicase ddx5 
 zma-u.5   100284481   ATP-dependent RNA helicase 
 osa-u.5   9270769   uncharacterized LOC9270769 
 osa-u.5   4351499   DEAD-box ATP-dependent RNA helicase 5-like 
 ath-u.5   AT2G28600   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100809099   pre-mRNA-processing ATP-dependent RNA helicase prp5 
 sly-u.5   101253955   DEAD-box ATP-dependent RNA helicase 5 
 vvi-u.5   109123768   uncharacterized LOC109123768 
 vvi-u.5   100260841   uncharacterized LOC100260841 
 ppo-u.5   7455505   pre-mRNA-processing ATP-dependent RNA helicase PRP5 
 mtr-u.5   11424303   pre-mRNA-processing ATP-dependent RNA helicase prp5 

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Top 50 coexpressed genes to 8074878 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074878 (sbi-r.1 coexpression data)

CoexMap"8074878"


sbiLOC8074878 | Entrez gene ID : 8074878      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (7 genes)  IEA  
GO:0033962 [list] [network] P-body assembly  (11 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (10 genes)  IEA  
GO:0000932 [list] [network] P-body  (47 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002441826.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002441826.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_002441826.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074878

.
zma-u.5
for
100284481

.
osa-u.5
for
9270769

.
osa-u.5
for
4351499

.
ath-u.5
for
AT2G28600

.
gma-u.5
for
100809099

.
sly-u.5
for
101253955

.
vvi-u.5
for
109123768

.
vvi-u.5
for
100260841

.
ppo-u.5
for
7455505

.
mtr-u.5
for
11424303

.


Ortholog ID: 10682
Species ath gma sly osa osa zma vvi vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G28600 LOC100809099 LOC101253955 LOC4351499 LOC9270769 LOC100284481 LOC109123768 LOC100260841 LOC7455505 LOC11424303 LOC123086358 LOC123096632 LOC123448162 LOC107950199 LOC106433605 LOC106443649 LOC8074878 LOC102578489 LOC102629442 LOC100844213 LOC107760729 LOC107802981
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein pre-mRNA-processing ATP-dependent RNA helicase prp5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5-like uncharacterized LOC9270769 ATP-dependent RNA helicase uncharacterized LOC109123768 uncharacterized LOC100260841 pre-mRNA-processing ATP-dependent RNA helicase PRP5 pre-mRNA-processing ATP-dependent RNA helicase prp5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 ATP-dependent RNA helicase DBP3 ATP-dependent RNA helicase DBP3 ATP-dependent RNA helicase DBP3-like probable ATP-dependent RNA helicase ddx5 uncharacterized LOC102578489 DEAD-box ATP-dependent RNA helicase 5 probable ATP-dependent RNA helicase ddx5 uncharacterized LOC107760729 uncharacterized LOC107802981
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817408 100809099 101253955 4351499 9270769 100284481 109123768 100260841 7455505 11424303 123086358 123096632 123448162 107950199 106433605 106443649 8074878 102578489 102629442 100844213 107760729 107802981
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