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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075258   1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 
 zma-u.5   542238   amylose extender 1 
 zma-u.5   542315   starch branching enzyme 1 
 zma-u.5   542342   starch branching enzyme 3 
 osa-u.5   4342117   1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic-like 
 osa-u.5   4329532   1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 
 osa-u.5   4335763   1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 
 ath-u.5   SBE2.2   starch branching enzyme 2.2 
 ath-u.5   SBE2.1   starch branching enzyme 2.1 
 gma-u.5   100792499   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 gma-u.5   100785968   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 gma-u.5   100816963   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 sly-u.5   101258151   1,4-alpha-glucan-branching enzyme 
 sly-u.5   101268420   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 vvi-u.5   100257371   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 vvi-u.5   100254475   1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 
 ppo-u.5   7494695   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 ppo-u.5   18100061   1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 
 mtr-u.5   11427173   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 
 mtr-u.5   25490305   1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 

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Top 50 coexpressed genes to 8075258 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075258 (sbi-r.1 coexpression data)

CoexMap"8075258"


sbiLOC8075258 | Entrez gene ID : 8075258      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00500 [list] [network] Starch and sucrose metabolism (169 genes)
GO BP
GO:0005982 [list] [network] starch metabolic process  (8 genes)  IEA  
GO:0005978 [list] [network] glycogen biosynthetic process  (10 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003844 [list] [network] 1,4-alpha-glucan branching enzyme activity  (4 genes)  IEA  
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (389 genes)  IEA  
GO:0043169 [list] [network] cation binding  (2100 genes)  IEA  
Protein XP_002447772.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_002447772.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002447772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075258

.
zma-u.5
for
542238

.
zma-u.5
for
542315

.
zma-u.5
for
542342

.
osa-u.5
for
4342117

.
osa-u.5
for
4329532

.
osa-u.5
for
4335763

.
ath-u.5
for
SBE2.2

.
ath-u.5
for
SBE2.1

.
gma-u.5
for
100792499

.
gma-u.5
for
100785968

.
gma-u.5
for
100816963

.
sly-u.5
for
101258151

.
sly-u.5
for
101268420

.
vvi-u.5
for
100257371

.
vvi-u.5
for
100254475

.
ppo-u.5
for
7494695

.
ppo-u.5
for
18100061

.
mtr-u.5
for
11427173

.
mtr-u.5
for
25490305

.


Ortholog ID: 2136
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol SBE2.2 SBE2.1 LOC100785968 LOC100816963 LOC101258151 LOC101268420 LOC4329532 LOC4342117 LOC542238 LOC542315 LOC103867285 LOC103865540 LOC100254475 LOC100257371 LOC7494695 LOC18100061 LOC11427173 LOC25490305 LOC123045387 LOC780587 LOC123426641 LOC123412920 LOC107910685 LOC107948121 LOC106372643 LOC106430026 CHLRE_06g270100v5 CHLRE_10g444700v5 LOC8069225 LOC8059621 LOC102596498 LOC102590711 LOC102614944 LOC102613730 LOC100841615 LOC100831694 LOC107827216 LOC107778845
Function* starch branching enzyme 2.2 starch branching enzyme 2.1 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic-like amylose extender 1 starch branching enzyme 1 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic-like 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like uncharacterized protein uncharacterized protein 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme-like 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic-like 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 10
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 10
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 10
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 9
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 8
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 8
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 8
bra00730 Thiamine metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 7
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
ppo04016 MAPK signaling pathway - plant 4
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 2
mtr04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 7
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 6
cre00520 Amino sugar and nucleotide sugar metabolism 3
cre01250 Biosynthesis of nucleotide sugars 3
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 6
cre01200 Carbon metabolism 6
cre00710 Carbon fixation by Calvin cycle 5
cre00030 Pentose phosphate pathway 4
cre00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 9
sbi00330 Arginine and proline metabolism 3
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 12
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 10
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 8
sot00520 Amino sugar and nucleotide sugar metabolism 5
sot01250 Biosynthesis of nucleotide sugars 5
sot00561 Glycerolipid metabolism 3
sot00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 7
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 5
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit00061 Fatty acid biosynthesis 3
cit01040 Biosynthesis of unsaturated fatty acids 3
cit01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 7
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 9
bdi00730 Thiamine metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831769 818212 100785968 100816963 101258151 101268420 4329532 4342117 542238 542315 103867285 103865540 100254475 100257371 7494695 18100061 11427173 25490305 123045387 780587 123426641 123412920 107910685 107948121 106372643 106430026 5721860 5716160 8069225 8059621 102596498 102590711 102614944 102613730 100841615 100831694 107827216 107778845
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