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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075550   ribonuclease E/G-like protein, chloroplastic 
 zma-u.5   103643177   ribonuclease E/G-like protein, chloroplastic 
 osa-u.5   4345271   ribonuclease E/G-like protein, chloroplastic 
 ath-u.5   RNEE/G   RNAse E/G-like protein 
 gma-u.5   100809907   ribonuclease E/G-like protein, chloroplastic 
 gma-u.5   100795436   ribonuclease E/G-like protein, chloroplastic 
 sly-u.5   100136876   ribonuclease E 
 vvi-u.5   100256290   ribonuclease E/G-like protein, chloroplastic 
 ppo-u.5   7469343   ribonuclease E/G-like protein, chloroplastic 
 mtr-u.5   11409378   ribonuclease E/G-like protein, chloroplastic 

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Top 50 coexpressed genes to 8075550 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075550 (sbi-r.1 coexpression data)

CoexMap"8075550"


sbiLOC8075550 | Entrez gene ID : 8075550    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (205 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:2001070 [list] [network] starch binding  (13 genes)  IEA  
GO:0004540 [list] [network] RNA nuclease activity  (121 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021312964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_021312964.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_021312964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075550

.
zma-u.5
for
103643177

.
osa-u.5
for
4345271

.
ath-u.5
for
RNEE/G

.
gma-u.5
for
100809907

.
gma-u.5
for
100795436

.
sly-u.5
for
100136876

.
vvi-u.5
for
100256290

.
ppo-u.5
for
7469343

.
mtr-u.5
for
11409378

.


Ortholog ID: 10644
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol RNEE/G LOC100795436 LOC100809907 LOC100136876 LOC4345271 LOC103643177 LOC103828537 LOC100256290 LOC7469343 LOC11409378 LOC123165327 LOC123160510 LOC123413152 LOC107912469 LOC107924528 LOC106405683 LOC106366665 LOC8075550 LOC102583907 LOC102607608 LOC100832256 LOC107760436 LOC107793058
Function* RNAse E/G-like protein ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi03010 Ribosome 5
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814965 100795436 100809907 100136876 4345271 103643177 103828537 100256290 7469343 11409378 123165327 123160510 123413152 107912469 107924528 106405683 106366665 8075550 102583907 102607608 100832256 107760436 107793058
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