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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075587   GTP-binding protein TypA/BipA homolog 
 zma-u.5   100382669   uncharacterized LOC100382669 
 osa-u.5   4327008   uncharacterized LOC4327008 
 ath-u.5   EMB2785   elongation factor family protein 
 gma-u.5   100789218   50S ribosomal subunit assembly factor BipA 
 gma-u.5   100782425   50S ribosomal subunit assembly factor BipA 
 sly-u.5   101257189   uncharacterized LOC101257189 
 vvi-u.5   100247278   uncharacterized LOC100247278 
 ppo-u.5   18104559   uncharacterized LOC18104559 
 mtr-u.5   11419376   50S ribosomal subunit assembly factor BipA 

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Top 50 coexpressed genes to 8075587 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075587 (sbi-r.1 coexpression data)

CoexMap"8075587"


sbiLOC8075587 | Entrez gene ID : 8075587      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (562 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (185 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (211 genes)  IEA  
Protein XP_002456366.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_002456366.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_002456366.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075587

.
zma-u.5
for
100382669

.
osa-u.5
for
4327008

.
ath-u.5
for
EMB2785

.
gma-u.5
for
100789218

.
gma-u.5
for
100782425

.
sly-u.5
for
101257189

.
vvi-u.5
for
100247278

.
ppo-u.5
for
18104559

.
mtr-u.5
for
11419376

.


Ortholog ID: 9409
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB2785 LOC100782425 LOC100789218 LOC101257189 LOC4327008 LOC100382669 LOC103865101 LOC100247278 LOC18104559 LOC11419376 LOC123079190 LOC123062075 LOC123444426 LOC107934354 LOC107959777 LOC106406589 LOC106437566 CHLRE_13g606000v5 LOC8075587 LOC102591349 LOC102618580 LOC100840121 LOC107788877 LOC107784041
Function* elongation factor family protein 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA uncharacterized LOC101257189 uncharacterized LOC4327008 uncharacterized LOC100382669 GTP-binding protein TypA/BipA homolog uncharacterized LOC100247278 uncharacterized LOC18104559 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA-like uncharacterized protein GTP-binding protein TypA/BipA homolog GTP-binding protein TypA/BipA homolog uncharacterized LOC102618580 GTP-binding protein TypA/BipA homolog uncharacterized LOC107788877 uncharacterized LOC107784041
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03010 Ribosome 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03020 RNA polymerase 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817658 100782425 100789218 101257189 4327008 100382669 103865101 100247278 18104559 11419376 123079190 123062075 123444426 107934354 107959777 106406589 106437566 5724634 8075587 102591349 102618580 100840121 107788877 107784041
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