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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075640   F-box protein SKIP28 
 zma-u.5   100273105   uncharacterized LOC100273105 
 osa-u.5   4345622   F-box protein SKIP28 
 ath-u.5   MEE11   RNI-like superfamily protein 
 gma-u.5   100806504   F-box protein SKIP28-like 
 sly-u.5   101254415   F-box protein SKIP28 
 vvi-u.5   100268116   F-box protein SKIP28 
 ppo-u.5   7462685   F-box protein SKIP28 
 mtr-u.5   11412387   F-box protein SKIP28 

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Top 50 coexpressed genes to 8075640 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075640 (sbi-r.1 coexpression data)

CoexMap"8075640"


sbiLOC8075640 | Entrez gene ID : 8075640      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002444372.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_002444372.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_002444372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075640

.
zma-u.5
for
100273105

.
osa-u.5
for
4345622

.
ath-u.5
for
MEE11

.
gma-u.5
for
100806504

.
sly-u.5
for
101254415

.
vvi-u.5
for
100268116

.
ppo-u.5
for
7462685

.
mtr-u.5
for
11412387

.


Ortholog ID: 7910
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol MEE11 LOC100806504 LOC101254415 LOC4345622 LOC100273105 LOC103854052 LOC100268116 LOC7462685 LOC11412387 LOC123190295 LOC123054416 LOC123427730 LOC107922203 LOC107893723 LOC125590590 LOC8075640 LOC102586841 LOC102622506 LOC100822257 LOC107766467 LOC107811541
Function* RNI-like superfamily protein F-box protein SKIP28-like F-box protein SKIP28 F-box protein SKIP28 uncharacterized LOC100273105 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like F-box protein SKIP28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma00500 Starch and sucrose metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 5
osa00310 Lysine degradation 3
osa00071 Fatty acid degradation 3
osa03082 ATP-dependent chromatin remodeling 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 3
nta00480 Glutathione metabolism 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814691 100806504 101254415 4345622 100273105 103854052 100268116 7462685 11412387 123190295 123054416 123427730 107922203 107893723 125590590 8075640 102586841 102622506 100822257 107766467 107811541
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