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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075739   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 zma-u.5   103627701   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 osa-u.5   4330670   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 ath-u.5   EMB25   DEAD/DEAH box helicase 
 gma-u.5   100780908   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 sly-u.5   101246924   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 vvi-u.5   100253458   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 ppo-u.5   7492412   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 mtr-u.5   11413717   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 

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Top 50 coexpressed genes to 8075739 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075739 (sbi-r.1 coexpression data)

CoexMap"8075739"


sbiLOC8075739 | Entrez gene ID : 8075739      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay  (2 genes)  IEA  
GO CC
GO:0055087 [list] [network] Ski complex  (3 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (61 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3505 genes)  IEA  
Protein XP_002454314.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_002454314.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_002454314.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075739

.
zma-u.5
for
103627701

.
osa-u.5
for
4330670

.
ath-u.5
for
EMB25

.
gma-u.5
for
100780908

.
sly-u.5
for
101246924

.
vvi-u.5
for
100253458

.
ppo-u.5
for
7492412

.
mtr-u.5
for
11413717

.


Ortholog ID: 11114
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB25 LOC100780908 LOC101246924 LOC4330670 LOC103627701 LOC103831550 LOC100253458 LOC7492412 LOC11413717 LOC123145542 LOC123128420 LOC123400978 LOC107903689 LOC107886318 LOC106429555 LOC106347226 CHLRE_01g027150v5 LOC8075739 LOC102584107 LOC102612885 LOC100842242 LOC107809361 LOC107802326
Function* DEAD/DEAH box helicase DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like uncharacterized protein DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi00051 Fructose and mannose metabolism 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843343 100780908 101246924 4330670 103627701 103831550 100253458 7492412 11413717 123145542 123128420 123400978 107903689 107886318 106429555 106347226 5715305 8075739 102584107 102612885 100842242 107809361 107802326
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