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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076243   ubiquitin carboxyl-terminal hydrolase 3 
 zma-u.5   100381623   uncharacterized LOC100381623 
 zma-u.5   100272329   Ubiquitin carboxyl-terminal hydrolase 3 
 zma-u.5   100282795   ubiquitin carboxyl-terminal hydrolase isozyme L3 
 osa-u.5   4330187   ubiquitin carboxyl-terminal hydrolase 3 
 osa-u.5   4336569   ubiquitin carboxyl-terminal hydrolase 3 
 osa-u.5   4337328   ubiquitin carboxyl-terminal hydrolase 3 
 ath-u.5   UCH3   ubiquitin C-terminal hydrolase 3 
 gma-u.5   100527755   putative ubiquitin carboxyl-terminal hydrolase 
 gma-u.5   100816564   ubiquitin carboxyl-terminal hydrolase isozyme L3-like 
 gma-u.5   100527718   ubiquitin carboxyl-terminal hydrolase 3 
 sly-u.5   101268896   ubiquitin carboxyl-terminal hydrolase 3-like 
 sly-u.5   101249374   ubiquitin carboxyl-terminal hydrolase 3 
 vvi-u.5   100244786   ubiquitin carboxyl-terminal hydrolase 3 
 ppo-u.5   7471651   ubiquitin carboxyl-terminal hydrolase 3 
 mtr-u.5   11411905   ubiquitin carboxyl-terminal hydrolase 3 

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Top 50 coexpressed genes to 8076243 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8076243 (sbi-r.1 coexpression data)

CoexMap"8076243"


sbiLOC8076243 | Entrez gene ID : 8076243      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 1 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (78 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (64 genes)  IEA  
Protein XP_002454549.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_002454549.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002454549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076243

.
zma-u.5
for
100381623

.
zma-u.5
for
100272329

.
zma-u.5
for
100282795

.
osa-u.5
for
4330187

.
osa-u.5
for
4336569

.
osa-u.5
for
4337328

.
ath-u.5
for
UCH3

.
gma-u.5
for
100527755

.
gma-u.5
for
100816564

.
gma-u.5
for
100527718

.
sly-u.5
for
101268896

.
sly-u.5
for
101249374

.
vvi-u.5
for
100244786

.
ppo-u.5
for
7471651

.
mtr-u.5
for
11411905

.


Ortholog ID: 3360
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol UCH3 LOC100527718 LOC100527755 LOC101249374 LOC101268896 LOC4337328 LOC4336569 LOC100282795 LOC100381623 LOC103855439 LOC103860918 LOC100244786 LOC7471651 LOC11411905 LOC123054091 LOC123427415 LOC123428279 LOC107939903 LOC107939699 LOC106440245 LOC106427999 CHLRE_03g194250v5 LOC8082570 LOC8083347 LOC102598496 LOC102598097 LOC102611974 LOC102612768 LOC100844074 LOC100829656 LOC107771406 LOC107760663
Function* ubiquitin C-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 putative ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase isozyme L3 uncharacterized LOC100381623 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 uncharacterized protein ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase isozyme L3-like ubiquitin carboxyl-terminal hydrolase isozyme L3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma03050 Proteasome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00270 Cysteine and methionine metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma03010 Ribosome 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 5
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 3
bra00592 alpha-Linolenic acid metabolism 3
bra01040 Biosynthesis of unsaturated fatty acids 3
bra01212 Fatty acid metabolism 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 10
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna04145 Phagosome 6
bna03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00053 Ascorbate and aldarate metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03015 mRNA surveillance pathway 2
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03050 Proteasome 3
cit03060 Protein export 2
cit04145 Phagosome 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
bdi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827466 100527718 100527755 101249374 101268896 4337328 4336569 100282795 100381623 103855439 103860918 100244786 7471651 11411905 123054091 123427415 123428279 107939903 107939699 106440245 106427999 5718718 8082570 8083347 102598496 102598097 102611974 102612768 100844074 100829656 107771406 107760663
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