ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8076739	ESX-1 secretion-associated protein EspK
sbi-r.1	8061076	serine/arginine repetitive matrix protein 1
zma-u.5	100279454	uncharacterized LOC100279454
osa-u.5	4341332	uncharacterized LOC4341332
osa-u.5	4339469	pathogen-associated molecular patterns-induced protein A70
osa-u.5	4327827	pathogen-associated molecular patterns-induced protein A70
tae-r.2	123151796	uncharacterized LOC123151796
tae-r.2	123151794	uncharacterized LOC123151794
hvu-r.1	123411516	pathogen-associated molecular patterns-induced protein A70-like
bdi-r.1	100823254	uncharacterized LOC100823254
bdi-r.1	100829968	uncharacterized LOC100829968
bdi-r.1	100832635	putative uncharacterized protein DDB_G0291608
ath-u.5	AT2G26110	bromodomain protein (DUF761)
ath-u.5	AT4G26130	cotton fiber protein
ath-u.5	AT5G56980	cotton fiber protein
gma-u.5	100775337	pathogen-associated molecular patterns-induced protein A70
gma-u.5	100781094	pathogen-associated molecular patterns-induced protein A70
gma-u.5	102664184	pathogen-associated molecular patterns-induced protein A70
sly-u.5	101258979	pathogen-associated molecular patterns-induced protein A70
sly-u.5	101244302	uncharacterized LOC101244302
bra-r.6	103851795	pathogen-associated molecular patterns-induced protein A70
bra-r.6	103845132	pathogen-associated molecular patterns-induced protein A70-like
bra-r.6	103841385	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100247359	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100249297	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7484676	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7462259	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7476653	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494233	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	11411531	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494230	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107962851	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	121232306	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107953887	pathogen-associated molecular patterns-induced protein A70
bna-r.1	BNAC02G11940D	pathogen-associated molecular patterns-induced protein A70
bna-r.1	106371488	pathogen-associated molecular patterns-induced protein A70-like
bna-r.1	BNAC01G18140D	pathogen-associated molecular patterns-induced protein A70
sot-r.1	102597801	sex-determining region Y protein-like
sot-r.1	102602872	uncharacterized LOC102602872
cit-r.1	102625532	pathogen-associated molecular patterns-induced protein A70
cit-r.1	102610165	pathogen-associated molecular patterns-induced protein A70
nta-r.1	107828153	uncharacterized LOC107828153
nta-r.1	107816078	uncharacterized LOC107816078
nta-r.1	107813775	uncharacterized LOC107813775

Top 50 coexpressed genes to 8076739 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8076739 (sbi-r.1 coexpression data)

CoexMap"8076739"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002437177.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 3, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1

(predict for XP_002437177.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_002437177.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8076739	sbi-r.1 for 8061076	zma-u.5 for 100279454	osa-u.5 for 4341332	osa-u.5 for 4339469	osa-u.5 for 4327827	tae-r.2 for 123151796	tae-r.2 for 123151794	hvu-r.1 for 123411516	bdi-r.1 for 100823254	bdi-r.1 for 100829968	bdi-r.1 for 100832635	ath-u.5 for AT2G26110	ath-u.5 for AT4G26130	ath-u.5 for AT5G56980	gma-u.5 for 100775337	gma-u.5 for 100781094	gma-u.5 for 102664184	sly-u.5 for 101258979	sly-u.5 for 101244302	bra-r.6 for 103851795	bra-r.6 for 103845132	bra-r.6 for 103841385	vvi-u.5 for 100247359	vvi-u.5 for 100249297	ppo-u.5 for 7484676	ppo-u.5 for 7462259	ppo-u.5 for 7476653	mtr-u.5 for 25494233	mtr-u.5 for 11411531	mtr-u.5 for 25494230	ghi-r.1 for 107962851	ghi-r.1 for 121232306	ghi-r.1 for 107953887	bna-r.1 for BNAC02G11940D	bna-r.1 for 106371488	bna-r.1 for BNAC01G18140D	sot-r.1 for 102597801	sot-r.1 for 102602872	cit-r.1 for 102625532	cit-r.1 for 102610165	nta-r.1 for 107828153	nta-r.1 for 107816078	nta-r.1 for 107813775

Ortholog

Ortholog ID: 1607

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

ESX-1 secretion-associated protein EspK

serine/arginine repetitive matrix protein 1

uncharacterized LOC100279454

uncharacterized LOC4341332

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC123167760

pathogen-associated molecular patterns-induced protein A70-like

uncharacterized LOC100823254

uncharacterized LOC100829968

putative uncharacterized protein DDB_G0291608

bromodomain protein (DUF761)

cotton fiber protein

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC101244302

pathogen-associated molecular patterns-induced protein A70

pathogen-associated molecular patterns-induced protein A70-like

pathogen-associated molecular patterns-induced protein A70

sex-determining region Y protein-like

uncharacterized LOC102602872

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC107816078

uncharacterized LOC107832648

uncharacterized LOC107790886

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	3
bdi04075	Plant hormone signal transduction	3
bdi00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00260	Glycine, serine and threonine metabolism	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00710	Carbon fixation by Calvin cycle	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr03060	Protein export	3
mtr04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	5
nta00941	Flavonoid biosynthesis	4
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

8076739

8061076

100279454

4341332

4339469

4327827

123160636

123159809

123167760

123411516

123417211

100823254

100829968

100832635

817151

828719

835800

100775337

100781094

102670321

101258979

101244302

103851795

103845132

103841385

100247359

100249297

7484676

7462259

7476653

25494233

11411531

25494230

107929877

107894802

106377547

106396461

106406776

102597801

102602872

102625532

102610165

107816078

107832648

107790886

The preparation time of this page was 0.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	3	2	1	3	3	3	2	3	2	3	3	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8076739 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076739 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**