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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076845   carbon catabolite repressor protein 4 homolog 4 
 zma-u.5   100282428   uncharacterized LOC100282428 
 osa-u.5   4338672   carbon catabolite repressor protein 4 homolog 4 
 ath-u.5   AT1G31500   DNAse I-like superfamily protein 
 gma-u.5   100775932   carbon catabolite repressor protein 4 homolog 4 
 sly-u.5   101260665   exonuclease-endonuclease-phosphatase superfamily protein 
 vvi-u.5   100256249   carbon catabolite repressor protein 4 homolog 4 
 ppo-u.5   7465489   carbon catabolite repressor protein 4 homolog 4 
 mtr-u.5   11416580   carbon catabolite repressor protein 4 homolog 4 

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Top 50 coexpressed genes to 8076845 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8076845 (sbi-r.1 coexpression data)

CoexMap"8076845"


sbiLOC8076845 | Entrez gene ID : 8076845      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03018 [list] [network] RNA degradation (112 genes)
GO BP
GO CC
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (17 genes)  IEA  
Protein XP_002441039.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_002441039.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_002441039.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076845

.
zma-u.5
for
100282428

.
osa-u.5
for
4338672

.
ath-u.5
for
AT1G31500

.
gma-u.5
for
100775932

.
sly-u.5
for
101260665

.
vvi-u.5
for
100256249

.
ppo-u.5
for
7465489

.
mtr-u.5
for
11416580

.


Ortholog ID: 9823
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G31500 LOC100775932 LOC101260665 LOC4338672 LOC100282428 LOC103833806 LOC103840234 LOC100256249 LOC7465489 LOC11416580 LOC123181872 LOC123131031 LOC123439722 LOC107933500 LOC107946845 LOC106345533 LOC106351701 LOC8076845 LOC102585458 LOC102627526 LOC100836451 LOC107794486 LOC107817633
Function* DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 4 exonuclease-endonuclease-phosphatase superfamily protein carbon catabolite repressor protein 4 homolog 4 uncharacterized LOC100282428 glucose-repressible alcohol dehydrogenase transcriptional effector glucose-repressible alcohol dehydrogenase transcriptional effector carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01210 2-Oxocarboxylic acid metabolism 6
osa00785 Lipoic acid metabolism 6
osa01200 Carbon metabolism 6
osa00010 Glycolysis / Gluconeogenesis 5
osa00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 3
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae01240 Biosynthesis of cofactors 6
tae00230 Purine metabolism 5
tae01232 Nucleotide metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 3
nta03010 Ribosome 3
nta03018 RNA degradation 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840040 100775932 101260665 4338672 100282428 103833806 103840234 100256249 7465489 11416580 123181872 123131031 123439722 107933500 107946845 106345533 106351701 8076845 102585458 102627526 100836451 107794486 107817633
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