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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076856   SNF2 domain-containing protein CLASSY 4 
 zma-u.5   103630322   SNF2 domain-containing protein CLASSY 4 
 osa-u.5   4338690   SNF2 domain-containing protein CLASSY 4 
 ath-u.5   CHR40   chromatin remodeling 40 
 ath-u.5   chr31   chromatin remodeling 31 
 gma-u.5   100807262   SNF2 domain-containing protein CLASSY 3 
 gma-u.5   100806733   SNF2 domain-containing protein CLASSY 3 
 sly-u.5   101245395   SNF2 domain-containing protein CLASSY 4-like 
 mtr-u.5   25498158   SNF2 domain-containing protein CLASSY 3 

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Top 50 coexpressed genes to 8076856 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8076856 (sbi-r.1 coexpression data)

CoexMap"8076856"


sbiLOC8076856 | Entrez gene ID : 8076856    
Species sbi zma osa ath gma sly mtr bra nta cre vvi cit hvu ppo bdi sot tae bna ghi
Paralog 1 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03440 [list] [network] Homologous recombination (62 genes)
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (16 genes)  IEA  
GO CC
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (42 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002439747.2 [sequence] [blastp]
XP_021303493.1 [sequence] [blastp]
XP_021303494.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  cysk_nucl 1  (predict for XP_002439747.2)
chlo 4,  nucl 3,  mito 2,  cyto_mito 1,  cysk_nucl 1  (predict for XP_021303493.1)
chlo 4,  nucl 3,  mito 1,  cysk_nucl 1  (predict for XP_021303494.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_002439747.2)
mito 3  (predict for XP_021303493.1)
mito 3  (predict for XP_021303494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076856

.
zma-u.5
for
103630322

.
osa-u.5
for
4338690

.
ath-u.5
for
CHR40

.
ath-u.5
for
chr31

.
gma-u.5
for
100807262

.
gma-u.5
for
100806733

.
sly-u.5
for
101245395

.
mtr-u.5
for
25498158

.


Ortholog ID: 1747
Species ath ath gma gma sly osa zma bra bra tae tae hvu ghi bna bna sbi sot cit bdi bdi nta nta
Symbol CHR40 chr31 LOC100806733 LOC100807262 LOC101252104 LOC4338690 LOC103630322 LOC103844121 LOC103860031 LOC123131456 LOC123181895 LOC123442278 LOC121212718 LOC106397725 LOC106414127 LOC8076856 LOC102589702 LOC102613667 LOC100831563 LOC100833676 LOC107809717 LOC107779582
Function* chromatin remodeling 40 chromatin remodeling 31 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 3
ghi00100 Steroid biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04142 Lysosome 2
nta04148 Efferocytosis 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822023 837051 100806733 100807262 101252104 4338690 103630322 103844121 103860031 123131456 123181895 123442278 121212718 106397725 106414127 8076856 102589702 102613667 100831563 100833676 107809717 107779582
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