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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077129   DEAD-box ATP-dependent RNA helicase 17 
 zma-u.5   100382837   uncharacterized LOC100382837 
 osa-u.5   4337589   DEAD-box ATP-dependent RNA helicase 17-like 
 ath-u.5   AT2G40700   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100805157   DEAD-box ATP-dependent RNA helicase 17 
 sly-u.5   101245966   DEAD-box ATP-dependent RNA helicase 17 
 vvi-u.5   100250946   DEAD-box ATP-dependent RNA helicase 17 
 ppo-u.5   7459243   DEAD-box ATP-dependent RNA helicase 17 
 mtr-u.5   25486540   DEAD-box ATP-dependent RNA helicase 17 
 mtr-u.5   11413589   DEAD-box ATP-dependent RNA helicase 17 

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Top 50 coexpressed genes to 8077129 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077129 (sbi-r.1 coexpression data)

CoexMap"8077129"


sbiLOC8077129 | Entrez gene ID : 8077129      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (293 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (61 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3505 genes)  IEA  
Protein XP_002439829.1 [sequence] [blastp]
XP_021303188.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for XP_002439829.1)
cyto 5,  nucl 4  (predict for XP_021303188.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002439829.1)
other 6  (predict for XP_021303188.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077129

.
zma-u.5
for
100382837

.
osa-u.5
for
4337589

.
ath-u.5
for
AT2G40700

.
gma-u.5
for
100805157

.
sly-u.5
for
101245966

.
vvi-u.5
for
100250946

.
ppo-u.5
for
7459243

.
mtr-u.5
for
25486540

.
mtr-u.5
for
11413589

.


Ortholog ID: 10037
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G40700 LOC100805157 LOC101245966 LOC4337589 LOC100382837 LOC103866515 LOC100250946 LOC7459243 LOC11413589 LOC25486540 LOC123186739 LOC123179957 LOC123441665 LOC107962229 LOC107931592 LOC106450691 LOC106396607 CHLRE_03g188550v5 LOC8077129 LOC102593698 LOC102609227 LOC100824689 LOC107790428 LOC107831279
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17-like uncharacterized LOC100382837 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 uncharacterized protein DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17 DEAD-box ATP-dependent RNA helicase 17-like DEAD-box ATP-dependent RNA helicase 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03040 Spliceosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta00740 Riboflavin metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818665 100805157 101245966 4337589 100382837 103866515 100250946 7459243 11413589 25486540 123186739 123179957 123441665 107962229 107931592 106450691 106396607 5717487 8077129 102593698 102609227 100824689 107790428 107831279
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