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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077241   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103647645   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103633130   putative E3 ubiquitin-protein ligase RF298 
 osa-u.5   4337764   putative E3 ubiquitin-protein ligase RF298 
 ath-u.5   AT4G03000   RING/U-box superfamily protein 
 ath-u.5   AT1G03365   RING/U-box superfamily protein 
 gma-u.5   100785921   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100777140   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100775512   putative E3 ubiquitin-protein ligase RF298 
 vvi-u.5   100249384   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7475938   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7469098   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11445891   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11427665   putative E3 ubiquitin-protein ligase RF4 

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Top 50 coexpressed genes to 8077241 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077241 (sbi-r.1 coexpression data)

CoexMap"8077241"


sbiLOC8077241 | Entrez gene ID : 8077241      
Species sbi zma osa ath gma vvi ppo mtr sly bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002462812.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cysk 2  (predict for XP_002462812.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_002462812.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077241

.
zma-u.5
for
103647645

.
zma-u.5
for
103633130

.
osa-u.5
for
4337764

.
ath-u.5
for
AT4G03000

.
ath-u.5
for
AT1G03365

.
gma-u.5
for
100785921

.
gma-u.5
for
100777140

.
gma-u.5
for
100775512

.
vvi-u.5
for
100249384

.
ppo-u.5
for
7475938

.
ppo-u.5
for
7469098

.
mtr-u.5
for
11445891

.
mtr-u.5
for
11427665

.


Ortholog ID: 3250
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT1G03365 AT4G03000 LOC100785921 LOC100818439 LOC101268285 LOC101267057 LOC4337764 LOC103647645 LOC103633130 LOC103836700 LOC103844512 LOC100249384 LOC7469098 LOC7475938 LOC11427665 LOC11445891 LOC123180377 LOC123111053 LOC123424372 LOC107929111 LOC106423082 LOC106401422 LOC8077241 LOC102579237 LOC102594650 LOC102610693 LOC102627994 LOC100835844 LOC107786506 LOC107819544
Function* RING/U-box superfamily protein RING/U-box superfamily protein putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 10723112 828112 100785921 100818439 101268285 101267057 4337764 103647645 103633130 103836700 103844512 100249384 7469098 7475938 11427665 11445891 123180377 123111053 123424372 107929111 106423082 106401422 8077241 102579237 102594650 102610693 102627994 100835844 107786506 107819544
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