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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077557   cyclin-A1-3 
 zma-u.5   103649996   cyclin-A1-1-like 
 zma-u.5   103635708   cyclin-A1-4 
 zma-u.5   542336   cyclin 2 
 osa-u.5   9268829   cyclin-A1-3-like 
 osa-u.5   4338177   cyclin-A1-4-like 
 ath-u.5   CYCA1;1   Cyclin A1;1 
 gma-u.5   CYCA1;1   mitotic cyclin a2-type 
 gma-u.5   100776207   cyclin-A1-1-like 
 gma-u.5   100789565   cyclin-A1-1 
 sly-u.5   CycA1   cyclin A1 
 vvi-u.5   100250590   cyclin-A1-1 
 ppo-u.5   7460975   cyclin-A1-1 
 ppo-u.5   18096203   cyclin-A1-1 
 mtr-u.5   25489689   cyclin-A1-1 

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Top 50 coexpressed genes to 8077557 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077557 (sbi-r.1 coexpression data)

CoexMap"8077557"


sbiLOC8077557 | Entrez gene ID : 8077557    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044772 [list] [network] mitotic cell cycle phase transition  (39 genes)  IEA  
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (52 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (70 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (49 genes)  IEA  
Protein XP_002454880.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002454880.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002454880.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077557

.
zma-u.5
for
103649996

.
zma-u.5
for
103635708

.
zma-u.5
for
542336

.
osa-u.5
for
9268829

.
osa-u.5
for
4338177

.
ath-u.5
for
CYCA1;1

.
gma-u.5
for
CYCA1;1

.
gma-u.5
for
100776207

.
gma-u.5
for
100789565

.
sly-u.5
for
CycA1

.
vvi-u.5
for
100250590

.
ppo-u.5
for
7460975

.
ppo-u.5
for
18096203

.
mtr-u.5
for
25489689

.


Ortholog ID: 3398
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol CYCA1;1 LOC100798216 LOC100776207 CycA1 LOC4338177 LOC9268829 LOC542336 LOC103649996 LOC103868732 LOC103851094 LOC100250590 LOC18096203 LOC7460975 LOC25489689 LOC123077889 LOC123112975 LOC123443271 LOC121210909 LOC107951959 LOC111213687 CHLRE_03g207900v5 LOC8078082 LOC8054654 LOC102582879 LOC102617267 LOC102616765 LOC100822112 LOC100845679 LOC107794571 LOC107783616
Function* Cyclin A1;1 cyclin-A1-4 cyclin-A1-1-like cyclin A1 cyclin-A1-4-like cyclin-A1-3-like cyclin 2 cyclin-A1-1-like cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-2 cyclin-A1-4 cyclin-A1-2-like cyclin-A1-1 cyclin-A1-1 cyclin-A1-1-like uncharacterized protein cyclin-A1-3 cyclin-A1-1 cyclin-A1-4 cyclin-A1-1 cyclin-A1-4-like cyclin-A1-4-like cyclin-A1-1-like cyclin-A1-4-like cyclin-A1-4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841014 100798216 100776207 543744 4338177 9268829 542336 103649996 103868732 103851094 100250590 18096203 7460975 25489689 123077889 123112975 123443271 121210909 107951959 111213687 5718813 8078082 8054654 102582879 102617267 102616765 100822112 100845679 107794571 107783616
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