ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100280017	uncharacterized LOC100280017
gma-u.5	100783198	uncharacterized LOC100783198
sly-u.5	101263729	uncharacterized LOC101263729
sly-u.5	101254273	uncharacterized LOC101254273
vvi-u.5	104880930	uncharacterized LOC104880930
ppo-u.5	7489266	uncharacterized LOC7489266
mtr-u.5	11437659	uncharacterized LOC11437659
mtr-u.5	11435663	uncharacterized LOC11435663
mtr-u.5	112416080	uncharacterized LOC112416080
ghi-r.1	107924143	uncharacterized LOC107924143
ghi-r.1	107954027	uncharacterized LOC107954027
ghi-r.1	107912463	uncharacterized LOC107912463
sot-r.1	102601862	uncharacterized LOC102601862
sot-r.1	102579324	uncharacterized LOC102579324
sot-r.1	102586110	uncharacterized LOC102586110
cit-r.1	102611435	uncharacterized LOC102611435
nta-r.1	107799891	uncharacterized LOC107799891
nta-r.1	107762583	uncharacterized LOC107762583
nta-r.1	107808906	uncharacterized LOC107808906

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003682 [list] [network] chromatin binding

(124 genes)

IEA

Protein

XP_002439722.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 3, chlo_mito 3

(predict for XP_002439722.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for XP_002439722.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100280017	gma-u.5 for 100783198	sly-u.5 for 101263729	sly-u.5 for 101254273	vvi-u.5 for 104880930	ppo-u.5 for 7489266	mtr-u.5 for 11437659	mtr-u.5 for 11435663	mtr-u.5 for 112416080	ghi-r.1 for 107924143	ghi-r.1 for 107954027	ghi-r.1 for 107912463	sot-r.1 for 102601862	sot-r.1 for 102579324	sot-r.1 for 102586110	cit-r.1 for 102611435	nta-r.1 for 107799891	nta-r.1 for 107762583	nta-r.1 for 107808906

Ortholog

Ortholog ID: 3485

Species

zma

tae

gma

sly

vvi

ppo

mtr

ghi

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100280017

uncharacterized LOC123054169

uncharacterized LOC123169542

uncharacterized LOC100783198

uncharacterized LOC101263729

uncharacterized LOC101254273

uncharacterized LOC104880930

uncharacterized LOC7489266

uncharacterized LOC11437659

uncharacterized LOC112416080

uncharacterized LOC11442208

uncharacterized LOC107954027

uncharacterized LOC107912463

uncharacterized LOC107933975

uncharacterized LOC102601862

uncharacterized LOC102579324

uncharacterized LOC102586110

uncharacterized LOC102611435

uncharacterized LOC107799891

uncharacterized LOC107762583

uncharacterized LOC107808906

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	5
tae00480	Glutathione metabolism	5
tae01200	Carbon metabolism	5
tae00910	Nitrogen metabolism	4
tae01310	Nitrogen cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae00480	Glutathione metabolism	3
tae01200	Carbon metabolism	3
tae00910	Nitrogen metabolism	3
tae01310	Nitrogen cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03440	Homologous recombination	2
gma03030	DNA replication	2
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	11
sly03040	Spliceosome	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00790	Folate biosynthesis	2
mtr01240	Biosynthesis of cofactors	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04626	Plant-pathogen interaction	2
ghi03040	Spliceosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	3
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100280017

123054169

123169542

100783198

101263729

101254273

104880930

7489266

11437659

112416080

11442208

107954027

107912463

107933975

102601862

102579324

102586110

102611435

107799891

107762583

107808906

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100280017 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280017 (zma-u.5 coexpression data)


Species	zma	gma	sly	vvi	ppo	mtr	ghi	sot	cit	nta	cre	bra	ath	hvu	bna	tae	bdi	osa	sbi
Paralog	1	1	2	1	1	3	3	3	1	3	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100280017 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280017 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**