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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8078753  DEAD-box ATP-dependent RNA helicase 39 
 zma-u.5  100191518  uncharacterized LOC100191518 
 osa-u.5  4325344  DEAD-box ATP-dependent RNA helicase 39-like 
 tae-r.2  123077481  DEAD-box ATP-dependent RNA helicase 39 
 tae-r.2  123068942  DEAD-box ATP-dependent RNA helicase 39 
 tae-r.2  123060414  DEAD-box ATP-dependent RNA helicase 39 
 hvu-r.1  123442935  DEAD-box ATP-dependent RNA helicase 39 
 bdi-r.1  100840295  DEAD-box ATP-dependent RNA helicase 39 
 ath-u.5  RH39  RH39 
 gma-u.5  100805709  DEAD-box ATP-dependent RNA helicase 39 
 sly-u.5  RES  DEAD-box ATP-dependent RNA helicase 39 
 bra-r.6  103858536  DEAD-box ATP-dependent RNA helicase 39 
 bra-r.6  103838871  DEAD-box ATP-dependent RNA helicase 39 
 vvi-u.5  100247785  DEAD-box ATP-dependent RNA helicase 39 
 ppo-u.5  7464782  DEAD-box ATP-dependent RNA helicase 39 
 mtr-u.5  25496263  DEAD-box ATP-dependent RNA helicase 39 
 ghi-r.1  107962311  DEAD-box ATP-dependent RNA helicase 39 
 ghi-r.1  107901756  DEAD-box ATP-dependent RNA helicase 39 
 bna-r.1  106423545  DEAD-box ATP-dependent RNA helicase 39 
 bna-r.1  106416672  DEAD-box ATP-dependent RNA helicase 47A 
 bna-r.1  106438498  DEAD-box ATP-dependent RNA helicase 39 
 cit-r.1  102611560  DEAD-box ATP-dependent RNA helicase 39-like 
 nta-r.1  107823954  DEAD-box ATP-dependent RNA helicase 39 
 nta-r.1  107794547  DEAD-box ATP-dependent RNA helicase 39 
 cre-r.1  CHLRE_01g033832v5  uncharacterized protein 

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Top 50 coexpressed genes to 8078753 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078753 (sbi-r.1 coexpression data)

CoexMap"8078753"


sbiLOC8078753 | Entrez gene ID : 8078753
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna cit nta cre sot
Paralog 1 1 1 3 1 1 1 1 1 2 1 1 1 2 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (61 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3505 genes)  IEA  
Protein XP_002455046.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002455046.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_002455046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8078753


zma-u.5
for
100191518


osa-u.5
for
4325344


tae-r.2
for
123077481


tae-r.2
for
123068942


tae-r.2
for
123060414


hvu-r.1
for
123442935


bdi-r.1
for
100840295


ath-u.5
for
RH39


gma-u.5
for
100805709


sly-u.5
for
RES


bra-r.6
for
103858536


bra-r.6
for
103838871


vvi-u.5
for
100247785


ppo-u.5
for
7464782


mtr-u.5
for
25496263


ghi-r.1
for
107962311


ghi-r.1
for
107901756


bna-r.1
for
106423545


bna-r.1
for
106416672


bna-r.1
for
106438498


cit-r.1
for
102611560


nta-r.1
for
107823954


nta-r.1
for
107794547


cre-r.1
for
CHLRE_01g033832v5



Ortholog ID: 10175
Species sbi zma osa tae tae tae hvu bdi ath gma sly bra bra vvi ppo mtr ghi ghi bna bna bna cit nta nta cre
Symbol LOC8078753 LOC100191518 LOC4325344 LOC123077481 LOC123068942 LOC123060414 LOC123442935 LOC100840295 RH39 LOC100805709 RES LOC103858536 LOC103838871 LOC100247785 LOC7464782 LOC25496263 LOC107962311 LOC107901756 LOC106423545 LOC106416672 LOC106438498 LOC102611560 LOC107823954 LOC107794547 CHLRE_01g033832v5
Function* DEAD-box ATP-dependent RNA helicase 39 uncharacterized LOC100191518 DEAD-box ATP-dependent RNA helicase 39-like DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 RH39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39-like DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03018 RNA degradation 2
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8078753 100191518 4325344 123077481 123068942 123060414 123442935 100840295 826559 100805709 101257152 103858536 103838871 100247785 7464782 25496263 107962311 107901756 106423545 106416672 106438498 102611560 107823954 107794547 5715429
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