Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078756   histidine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100284312   histidyl-tRNA synthetase 
 osa-u.5   4330767   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   HRS1   Histidyl-tRNA synthetase 1 
 ath-u.5   AT5G03406   Class II aaRS and biotin synthetases superfamily protein 
 gma-u.5   100793186   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101267504   histidine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100256739   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18100157   histidine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25499324   histidine--tRNA ligase, chloroplastic/mitochondrial 

close


Top 50 coexpressed genes to 8078756 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8078756 (sbi-r.1 coexpression data)

CoexMap"8078756"


sbiLOC8078756 | Entrez gene ID : 8078756      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00970 [list] [network] Aminoacyl-tRNA biosynthesis (105 genes)
GO BP
GO:0006427 [list] [network] histidyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004821 [list] [network] histidine-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002455049.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2,  cyto_mito 1  (predict for XP_002455049.1)
Subcellular
localization
TargetP
mito 8,  chlo 5  (predict for XP_002455049.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078756

.
zma-u.5
for
100284312

.
osa-u.5
for
4330767

.
ath-u.5
for
HRS1

.
ath-u.5
for
AT5G03406

.
gma-u.5
for
100793186

.
sly-u.5
for
101267504

.
vvi-u.5
for
100256739

.
ppo-u.5
for
18100157

.
mtr-u.5
for
25499324

.


Ortholog ID: 8973
Species ath ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol AT5G03406 HRS1 LOC100793186 LOC101267504 LOC4330767 LOC100284312 LOC103835191 LOC100256739 LOC18100157 LOC25499324 LOC123122700 LOC123190888 LOC123428244 LOC107952913 LOC107894617 LOC106361555 LOC106389754 LOC110432547 LOC8078756 LOC102585772 LOC102617736 LOC100835894 LOC107778161 LOC107804891
Function* Class II aaRS and biotin synthetases superfamily protein Histidyl-tRNA synthetase 1 histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidyl-tRNA synthetase histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial-like histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa01240 Biosynthesis of cofactors 5
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00970 Aminoacyl-tRNA biosynthesis 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo00900 Terpenoid backbone biosynthesis 2
ppo00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 8
bna01240 Biosynthesis of cofactors 8
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00061 Fatty acid biosynthesis 2
sbi00780 Biotin metabolism 2
sbi01212 Fatty acid metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 6
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3770629 823753 100793186 101267504 4330767 100284312 103835191 100256739 18100157 25499324 123122700 123190888 123428244 107952913 107894617 106361555 106389754 110432547 8078756 102585772 102617736 100835894 107778161 107804891
The preparation time of this page was 0.1 [sec].